RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 ZNF833PQ6ZTB9 187 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 C16orf82Q7Z2V1 217 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 OR2W3Q7Z3T1 314 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 MOB3BQ86TA1 216 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 IZUMO1Q8IYV9 350 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 OR8H3Q8N146 312 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 FAM71E2Q8N5Q1 922 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 OR5AU1Q8NGC0 362 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 OR10X1Q8NGY0 326 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 THRSPQ92748 146 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 RPEQ96AT9 228 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 SLC25A38Q96DW6 304 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 ABHD14BQ96IU4 210 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 YPEL2Q96QA6 119 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 AGMATQ9BSE5 352 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 CENPOQ9BU64 300 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 MRPL20Q9BYC9 149 aaKnown RBP3.99□□□□□ -1.77
USH1C-210ENST00000534556 C11orf54Q9H0W9 315 aaPredicted RBP3.99□□□□□ -1.77
USH1C-210ENST00000534556 CST11Q9H112 138 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 PLGRKTQ9HBL7 147 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 SPACA1Q9HBV2 294 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 Q9N2K0 584 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 RAB18Q9NP72 206 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 OR2S2Q9NQN1 319 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 STEAP1Q9UHE8 339 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 ZNF230Q9UIE0 474 aaPredicted RBP3.99□□□□□ -1.77
USH1C-210ENST00000534556 ZNF107Q9UII5 783 aaPredicted RBP3.99□□□□□ -1.77
USH1C-210ENST00000534556 PITPNC1Q9UKF7 332 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 HSF4Q9ULV5 492 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 MOB4Q9Y3A3 225 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 FBXO7Q9Y3I1 522 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 SORL1Q92673 2214 aa3.99□□□□□ -1.77
USH1C-210ENST00000534556 SAA2-SAA4A0A096LPE2 208 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 A0A1W2PRX2 142 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 FCN1O00602 326 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 SPINT2O43291 252 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 SSX5O60225 188 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 MRPS14O60783 128 aaKnown RBP3.98□□□□□ -1.77
USH1C-210ENST00000534556 FBXO24O75426 580 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 CA11O75493 328 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 ARL6IP5O75915 188 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 IGHG2P01859 326 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 CSF1P09603 554 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 GSTT2P0CG29 244 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 GSTT2BP0CG30 244 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 SAA2P0DJI9 122 aaPredicted RBP3.98□□□□□ -1.77
USH1C-210ENST00000534556 SMIM18P0DKX4 95 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 CT45A6P0DMU7 189 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 CT45A5P0DMU8 189 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 CT45A7P0DMV0 189 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 EGR2P11161 476 aaPredicted RBP3.98□□□□□ -1.77
USH1C-210ENST00000534556 PTHLHP12272 177 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 GNB3P16520 340 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 TMEM11P17152 192 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 RAB3BP20337 219 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 PSMA1P25786 263 aaKnown RBP3.98□□□□□ -1.77
USH1C-210ENST00000534556 CD1BP29016 333 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 BRS3P32247 399 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 SDC2P34741 201 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 CEACAM3P40198 252 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 HLA-DRB3P79483 266 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 SSBP2P81877 361 aaPredicted RBP3.98□□□□□ -1.77
USH1C-210ENST00000534556 NDPQ00604 133 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 CFHR3Q02985 330 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 MXD1Q05195 221 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 KIAA0141Q14154 515 aaPredicted RBP3.98□□□□□ -1.77
USH1C-210ENST00000534556 HES1Q14469 280 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 NEDD8Q15843 81 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 MRGPRG-AS1Q2M3A8 158 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 BEAN1Q3B7T3 259 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 Q3ZCU0 254 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 KCTD21Q4G0X4 260 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 OXLD1Q5BKU9 147 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 IGSF11Q5DX21 431 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 C9orf152Q5JTZ5 239 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 LY6G6FQ5SQ64 297 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 C6orf183Q5T699 404 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 SAMD5Q5TGI4 173 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 Q6ZTK2 550 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 CREB3L1Q96BA8 519 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 YIPF6Q96EC8 236 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 NEDD4LQ96PU5 975 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 S1PR3Q99500 378 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 CHCHD6Q9BRQ6 235 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 ABHD14AQ9BUJ0 271 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 YTHDF1Q9BYJ9 559 aaKnown RBP3.98□□□□□ -1.77
USH1C-210ENST00000534556 MMP27Q9H306 513 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 PCDHB16Q9NRJ7 776 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 PLEKHJ1Q9NW61 149 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 GNG12Q9UBI6 72 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 JPT1Q9UK76 154 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 RAB22AQ9UL26 194 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 BLOC1S6Q9UL45 172 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 RNF150Q9ULK6 438 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 STUB1Q9UNE7 303 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 GAB2Q9UQC2 676 aa3.98□□□□□ -1.77
USH1C-210ENST00000534556 AMMECR1Q9Y4X0 333 aaPredicted RBP3.98□□□□□ -1.77
USH1C-210ENST00000534556 HUWE1Q7Z6Z7 4374 aaKnown RBP3.98□□□□□ -1.77
USH1C-210ENST00000534556 A0A075B6Q4 140 aa3.97□□□□□ -1.77
USH1C-210ENST00000534556 SERPINE3A8MV23 424 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms