RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 THNSL2Q86YJ6 484 aa10.72□□□□□ -0.69
CAPN1-227ENST00000533909 CT45A3Q8NHU0 189 aa10.72□□□□□ -0.69
CAPN1-227ENST00000533909 RTN4IP1Q8WWV3 396 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-227ENST00000533909 YPEL2Q96QA6 119 aa10.72□□□□□ -0.69
CAPN1-227ENST00000533909 CENPOQ9BU64 300 aa10.72□□□□□ -0.69
CAPN1-227ENST00000533909 ZNF702PQ9H963 129 aa10.72□□□□□ -0.69
CAPN1-227ENST00000533909 SLC23A1Q9UHI7 598 aa10.72□□□□□ -0.69
CAPN1-227ENST00000533909 MOB4Q9Y3A3 225 aa10.72□□□□□ -0.69
CAPN1-227ENST00000533909 IGHV3-72A0A0B4J1Y9 119 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 SERPINE3A8MV23 424 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 SNRPBP14678 240 aaKnown RBP10.71□□□□□ -0.69
CAPN1-227ENST00000533909 HIST1H1DP16402 221 aaKnown RBP10.71□□□□□ -0.69
CAPN1-227ENST00000533909 ZBTB25P24278 435 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 BLCAPP62952 87 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 HABP2Q14520 560 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-227ENST00000533909 KIR2DS1Q14954 304 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 ABCA11PQ4W5N1 156 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 ZNF880Q6PDB4 577 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 ZNF439Q8NDP4 499 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 OR2T10Q8NGZ9 312 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 LGALS14Q8TCE9 139 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 CITED1Q99966 193 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 RNF167Q9H6Y7 350 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 Q9N2K0 584 aa10.71□□□□□ -0.69
CAPN1-227ENST00000533909 NCBP2LA6PVI3 153 aaKnown RBP10.7□□□□□ -0.7
CAPN1-227ENST00000533909 TRDCB7Z8K6 153 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 CLEC2LP0C7M8 214 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 CEACAM6P40199 344 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 ZNF134P52741 427 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 LSM3P62310 102 aaKnown RBP10.7□□□□□ -0.7
CAPN1-227ENST00000533909 HERPUD1Q15011 391 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 MOGAT2Q3SYC2 334 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 C5orf24Q7Z6I8 188 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 CROCCP3Q8IVE0 287 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 EDARADDQ8WWZ3 215 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 CFHR4Q92496 578 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 S1PR3Q99500 378 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 ETV7Q9Y603 341 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 PKD1L1Q8TDX9 2849 aa10.7□□□□□ -0.7
CAPN1-227ENST00000533909 FAM90A9PA6NNJ1 464 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 RAB27BO00194 218 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 LANCL1O43813 399 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 MOSP00540 346 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 CD1BP29016 333 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 CDNFQ49AH0 187 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 LY6G6FQ5SQ64 297 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 IZUMO1Q8IYV9 350 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 Q8N2B8 174 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 C11orf44Q8N8P7 122 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 OR4A4PQ8NGN8 299 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 ST6GALNAC6Q969X2 333 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 YIPF6Q96EC8 236 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 RHBDL2Q9NX52 303 aa10.69□□□□□ -0.7
CAPN1-227ENST00000533909 MFNGO00587 321 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 RAB29O14966 203 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 BET1O15155 118 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 ST8SIA5O15466 376 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 FABP7O15540 132 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 TMEM127O75204 238 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 FCGR3AP08637 254 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 SCTP09683 121 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 OR3A3P47888 321 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 SERPINB10P48595 397 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 ZNF137PP52743 207 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 SCAND1P57086 179 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 GNG2P59768 71 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 KRTAP10-3P60369 221 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 C2orf68Q2NKX9 166 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 TMEM95Q3KNT9 176 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 PRR31Q5SQ13 230 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 EAF1Q96JC9 268 aaPredicted RBP10.68□□□□□ -0.7
CAPN1-227ENST00000533909 GINS4Q9BRT9 223 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 GHITMQ9H3K2 345 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 PIPOXQ9P0Z9 390 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 OR1A1Q9P1Q5 309 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 ZNF221Q9UK13 617 aa10.68□□□□□ -0.7
CAPN1-227ENST00000533909 SAA2-SAA4A0A096LPE2 208 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 SH2D7A6NKC9 451 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-227ENST00000533909 FGF16O43320 207 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 FBXO24O75426 580 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 SAA2P0DJI9 122 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-227ENST00000533909 PITPNAQ00169 270 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 FBLN7Q53RD9 439 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 Q6ZPA2 131 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 CENPVQ7Z7K6 275 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-227ENST00000533909 OR8H1Q8NGG4 311 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 OR10J5Q8NHC4 309 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 RASL11BQ9BPW5 248 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 FUNDC2Q9BWH2 189 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 MRPL20Q9BYC9 149 aaKnown RBP10.67□□□□□ -0.7
CAPN1-227ENST00000533909 DIABLOQ9NR28 239 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 SERTAD4Q9NUC0 356 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 ZNF230Q9UIE0 474 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-227ENST00000533909 KCNK7Q9Y2U2 307 aa10.67□□□□□ -0.7
CAPN1-227ENST00000533909 TRIM64CA6NLI5 447 aa10.66□□□□□ -0.7
CAPN1-227ENST00000533909 GSTP1P09211 210 aaKnown RBP10.66□□□□□ -0.7
CAPN1-227ENST00000533909 DTYMKP23919 212 aa10.66□□□□□ -0.7
CAPN1-227ENST00000533909 GPR12P47775 334 aa10.66□□□□□ -0.7
CAPN1-227ENST00000533909 LSAMPQ13449 338 aa10.66□□□□□ -0.7
CAPN1-227ENST00000533909 EBI3Q14213 229 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms