RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644		Q8N9W7	124 aa		13.98	□□□□□ -0.17
BBS1-223	ENST00000533644	OR8H1	Q8NGG4	311 aa		13.98	□□□□□ -0.17
BBS1-223	ENST00000533644	CHPT1	Q8WUD6	406 aa		13.98	□□□□□ -0.17
BBS1-223	ENST00000533644	RIMS4	Q9H426	269 aa	Predicted RBP	13.98	□□□□□ -0.17
BBS1-223	ENST00000533644	PLEKHJ1	Q9NW61	149 aa		13.98	□□□□□ -0.17
BBS1-223	ENST00000533644	HSF4	Q9ULV5	492 aa		13.98	□□□□□ -0.17
BBS1-223	ENST00000533644	NOTCH3	Q9UM47	2321 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	LDLRAD4	O15165	306 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	RGS11	O94810	467 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	PSMD7	P51665	324 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	LSAMP	Q13449	338 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	SLC35E3	Q7Z769	313 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	OR51D1	Q8NGF3	324 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	FAM3D	Q96BQ1	224 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	NOL4L	Q96MY1	436 aa	Predicted RBP	13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	ABCG5	Q9H222	651 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	ABRACL	Q9P1F3	81 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	AK3	Q9UIJ7	227 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644		V9GY05	133 aa		13.97	□□□□□ -0.17
BBS1-223	ENST00000533644	TRAV1-2	A0A0B4J238	106 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	SHISA3	A0PJX4	238 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	NCBP2L	A6PVI3	153 aa	Known RBP	13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	SERPINE3	A8MV23	424 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	RANBP1	P43487	201 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	GPR12	P47775	334 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	TMEM50B	P56557	158 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	CLDN12	P56749	244 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	ZNF833P	Q6ZTB9	187 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	ZNF329	Q86UD4	541 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	FOXRED2	Q8IWF2	684 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	FAM71E2	Q8N5Q1	922 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	WFDC9	Q8NEX5	89 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	S1PR3	Q99500	378 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	IFI27L2	Q9H2X8	130 aa		13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.96	□□□□□ -0.17
BBS1-223	ENST00000533644	TRDV1	A0A1B0GX56	115 aa		13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	LINC01548	A6NM66	108 aa		13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	DENR	O43583	198 aa	Known RBP	13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	PF4V1	P10720	104 aa		13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	GAL	P22466	123 aa		13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	C2orf76	Q3KRA6	126 aa		13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	STPG2	Q8N412	459 aa		13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	OR2AK2	Q8NG84	335 aa		13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	C12orf4	Q9NQ89	552 aa		13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	STEAP1	Q9UHE8	339 aa		13.95	□□□□□ -0.18
BBS1-223	ENST00000533644	SAA2-SAA4	A0A096LPE2	208 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	AP4M1	O00189	453 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	SAA2	P0DJI9	122 aa	Predicted RBP	13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	OXLD1	Q5BKU9	147 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	KHDC1L	Q5JSQ8	128 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	HES5	Q5TA89	166 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	UBE2U	Q5VVX9	321 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	FAM71F2	Q6NXP2	309 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	COMMD1	Q8N668	190 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	OR56B1	Q8NGI3	324 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	SETD6	Q8TBK2	473 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	IL1F10	Q8WWZ1	152 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	RBMXL1	Q96E39	390 aa	Known RBP	13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	ARHGAP5-AS1	Q96IT6	56 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	NABP2	Q9BQ15	211 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	MRPL20	Q9BYC9	149 aa	Known RBP	13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	LINC00527	Q9UJ94	153 aa		13.94	□□□□□ -0.18
BBS1-223	ENST00000533644	TMEM272	A0A1B0GTI8	110 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	ITGB1BP1	O14713	200 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	PDCD5	O14737	125 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	OR3A3	P47888	321 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	VEGFC	P49767	419 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	F2RL1	P55085	397 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	OR10A3	P58181	314 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	RPL23A	P62750	156 aa	Known RBP	13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	SLC35B1	P78383	322 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	HLA-DRB3	P79483	266 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	PLA2G7	Q13093	441 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	PLAC9	Q5JTB6	97 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	SPART	Q8N0X7	666 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	RASL11B	Q9BPW5	248 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	ZNF251	Q9BRH9	671 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	PECR	Q9BY49	303 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644		Q9H521	79 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644		Q9N2K0	584 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	SLC23A1	Q9UHI7	598 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	RAB22A	Q9UL26	194 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	MGAT4A	Q9UM21	535 aa		13.93	□□□□□ -0.18
BBS1-223	ENST00000533644	IFITM5	A6NNB3	132 aa		13.92	□□□□□ -0.18
BBS1-223	ENST00000533644	ST8SIA5	O15466	376 aa		13.92	□□□□□ -0.18
BBS1-223	ENST00000533644	MYL9	P24844	172 aa		13.92	□□□□□ -0.18
BBS1-223	ENST00000533644	HSPB9	Q9BQS6	159 aa		13.92	□□□□□ -0.18
BBS1-223	ENST00000533644	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.92	□□□□□ -0.18
BBS1-223	ENST00000533644	PARP12	Q9H0J9	701 aa	Known RBP	13.92	□□□□□ -0.18
BBS1-223	ENST00000533644	ZNF580	Q9UK33	172 aa		13.92	□□□□□ -0.18
BBS1-223	ENST00000533644	PF4	P02776	101 aa		13.91	□□□□□ -0.18
BBS1-223	ENST00000533644	CD33	P20138	364 aa		13.91	□□□□□ -0.18
BBS1-223	ENST00000533644	SLC6A1	P30531	599 aa		13.91	□□□□□ -0.18
BBS1-223	ENST00000533644	SOX6	P35712	828 aa		13.91	□□□□□ -0.18
BBS1-223	ENST00000533644	ACTB	P60709	375 aa		13.91	□□□□□ -0.18
BBS1-223	ENST00000533644	ETV3L	Q6ZN32	361 aa		13.91	□□□□□ -0.18
BBS1-223	ENST00000533644	NR2C2AP	Q86WQ0	139 aa		13.91	□□□□□ -0.18
BBS1-223	ENST00000533644	FCGR1B	Q92637	280 aa		13.91	□□□□□ -0.18
BBS1-223	ENST00000533644	PHF21A	Q96BD5	680 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms