RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 C11orf71Q6IPW1 123 aa11.15□□□□□ -0.62
CDC27-210ENST00000533415 SSX8Q7RTT4 187 aa11.15□□□□□ -0.62
CDC27-210ENST00000533415 ZFAND1Q8TCF1 268 aa11.15□□□□□ -0.62
CDC27-210ENST00000533415 PPP1R1CQ8WVI7 109 aa11.15□□□□□ -0.62
CDC27-210ENST00000533415 CALYQ9NYX4 217 aa11.15□□□□□ -0.62
CDC27-210ENST00000533415 SIGLEC5O15389 551 aa11.15□□□□□ -0.63
CDC27-210ENST00000533415 PGLYRP1O75594 196 aaPredicted RBP11.15□□□□□ -0.63
CDC27-210ENST00000533415 OR2A4O95047 310 aa11.15□□□□□ -0.63
CDC27-210ENST00000533415 SCGB1D2O95969 90 aa11.15□□□□□ -0.63
CDC27-210ENST00000533415 CXCL2P19875 107 aa11.15□□□□□ -0.63
CDC27-210ENST00000533415 LGALSLQ3ZCW2 172 aaPredicted RBP11.15□□□□□ -0.63
CDC27-210ENST00000533415 C11orf87Q6NUJ2 197 aa11.15□□□□□ -0.63
CDC27-210ENST00000533415 ZNF561Q8N587 486 aa11.15□□□□□ -0.63
CDC27-210ENST00000533415 PCNPQ8WW12 178 aaKnown RBP11.15□□□□□ -0.63
CDC27-210ENST00000533415 OR2A7Q96R45 310 aa11.15□□□□□ -0.63
CDC27-210ENST00000533415 DIRC2Q96SL1 478 aa11.15□□□□□ -0.63
CDC27-210ENST00000533415 CBLN4Q9NTU7 201 aa11.15□□□□□ -0.63
CDC27-210ENST00000533415 TRAV38-1A0A0B4J264 116 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 C3orf85A0A1B0GTC6 90 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 DBX1A6NMT0 343 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 A6NNC1 897 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 PPIHO43447 177 aaKnown RBP11.14□□□□□ -0.63
CDC27-210ENST00000533415 GIPP09681 153 aaPredicted RBP11.14□□□□□ -0.63
CDC27-210ENST00000533415 RPL30P62888 115 aaKnown RBP11.14□□□□□ -0.63
CDC27-210ENST00000533415 RPL39P5Q59GN2 51 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 TMEM268Q5VZI3 342 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 HIST2H2BCQ6DN03 193 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 FAM185AQ8N0U4 392 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 DRAM1Q8N682 238 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 SCGB3A2Q96PL1 93 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 TANC2Q9HCD6 1990 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 GPR31O00270 319 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 MUC1P15941 1255 aaPredicted RBP11.14□□□□□ -0.63
CDC27-210ENST00000533415 IGFBP2P18065 325 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 LUMP51884 338 aaPredicted RBP11.14□□□□□ -0.63
CDC27-210ENST00000533415 SURF2Q15527 256 aaPredicted RBP11.14□□□□□ -0.63
CDC27-210ENST00000533415 C1QTNF12Q5T7M4 302 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 GGNBP1Q5YKI7 109 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 CLEC9AQ6UXN8 241 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 MOB1BQ7L9L4 216 aa11.14□□□□□ -0.63
CDC27-210ENST00000533415 RAMP3O60896 148 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 DAOP14920 347 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 S100A10P60903 97 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 Q3ZCU0 254 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 SLC35G3Q8N808 338 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 OR52M1Q8NGK5 317 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 COQ8AQ8NI60 647 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 MSI2Q96DH6 328 aaKnown RBP11.13□□□□□ -0.63
CDC27-210ENST00000533415 UBE2J1Q9Y385 318 aaPredicted RBP11.13□□□□□ -0.63
CDC27-210ENST00000533415 A0A0G2JRQ6 117 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 H7C1Q1 480 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 EPHA1P21709 976 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 RPL31P62899 125 aaKnown RBP11.13□□□□□ -0.63
CDC27-210ENST00000533415 SRSF7Q16629 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDC27-210ENST00000533415 FAHD2BQ6P2I3 314 aaPredicted RBP11.13□□□□□ -0.63
CDC27-210ENST00000533415 ZBTB8BQ8NAP8 495 aaPredicted RBP11.13□□□□□ -0.63
CDC27-210ENST00000533415 NINJ1Q92982 152 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 ERGIC1Q969X5 290 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 FAHD2AQ96GK7 314 aa11.13□□□□□ -0.63
CDC27-210ENST00000533415 NKX6-3A6NJ46 265 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 H0YIZ8 118 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 SPINT2O43291 252 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 RP2O75695 350 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 CTXN2P0C2S0 81 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 AGAP20933 346 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 LOXL3P58215 753 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 TMEM200BQ69YZ2 307 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 C1orf87Q8N0U7 546 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 OR5AC2Q9NZP5 309 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 PROP1O75360 226 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 CLDN1O95832 211 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 PAX6P26367 422 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 TAGLNQ01995 201 aaKnown RBP11.12□□□□□ -0.63
CDC27-210ENST00000533415 ZNF816Q0VGE8 651 aaPredicted RBP11.12□□□□□ -0.63
CDC27-210ENST00000533415 IAH1Q2TAA2 248 aaPredicted RBP11.12□□□□□ -0.63
CDC27-210ENST00000533415 C6orf183Q5T699 404 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 C14orf79Q96F83 325 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 TRAF4Q9BUZ4 470 aaPredicted RBP11.12□□□□□ -0.63
CDC27-210ENST00000533415 MBD2Q9UBB5 411 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 ZANQ9Y493 2812 aa11.12□□□□□ -0.63
CDC27-210ENST00000533415 UCP3P55916 312 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 RAP2BP61225 183 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 RAB32Q13637 225 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 GSG1LQ6UXU4 331 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 ZNF525Q8N782 197 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 PPP1R35Q8TAP8 253 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 TRGV10A0A0A0MS01 117 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 LINC00473A8K010 186 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 TNFRSF13BO14836 293 aaPredicted RBP11.11□□□□□ -0.63
CDC27-210ENST00000533415 MORN2Q502X0 79 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 PDZD9Q8IXQ8 264 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 LURAP1Q96LR2 239 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 HYLS1Q96M11 299 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 MAGT1Q9H0U3 335 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 RAB1BQ9H0U4 201 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 KCNIP3Q9Y2W7 256 aa11.11□□□□□ -0.63
CDC27-210ENST00000533415 NDUFB3O43676 98 aa11.1□□□□□ -0.63
CDC27-210ENST00000533415 IGKV1-39P01597 117 aa11.1□□□□□ -0.63
CDC27-210ENST00000533415 IGKV1D-39P04432 117 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms