RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SERTAD4Q9NUC0 356 aa16.34■□□□□ 0.21
CCS-208ENST00000533244 TRRAPQ9Y4A5 3859 aa16.34■□□□□ 0.21
CCS-208ENST00000533244 SERPINE3A8MV23 424 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 TXNL1O43396 289 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 TMEM127O75204 238 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 GNB3P16520 340 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 TGFBR1P36897 503 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 REG1BP48304 166 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 BLCAPP62952 87 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 EBI3Q14213 229 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 ODF3L1Q8IXM7 274 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 IZUMO1Q8IYV9 350 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 OR13F1Q8NGS4 319 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 IL1F10Q8WWZ1 152 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 ATG5Q9H1Y0 275 aa16.33■□□□□ 0.2
CCS-208ENST00000533244 AMY1AP04745 511 aa16.32■□□□□ 0.2
CCS-208ENST00000533244 AMY2AP04746 511 aa16.32■□□□□ 0.2
CCS-208ENST00000533244 FCGR3AP08637 254 aa16.32■□□□□ 0.2
CCS-208ENST00000533244 CD3GP09693 182 aa16.32■□□□□ 0.2
CCS-208ENST00000533244 Q6ZS46 218 aa16.32■□□□□ 0.2
CCS-208ENST00000533244 ETV7Q9Y603 341 aa16.32■□□□□ 0.2
CCS-208ENST00000533244 ITGB1BP1O14713 200 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 LANCL1O43813 399 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 SCTP09683 121 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 ARL6IP1Q15041 203 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 TGIF2LXQ8IUE1 241 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 LYG1Q8N1E2 194 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 SLC25A38Q96DW6 304 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 FUNDC2Q9BWH2 189 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 IFI27L2Q9H2X8 130 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 RHBDL2Q9NX52 303 aa16.31■□□□□ 0.2
CCS-208ENST00000533244 IGKV1-6A0A0C4DH72 117 aa16.3■□□□□ 0.2
CCS-208ENST00000533244 TRDCB7Z8K6 153 aa16.3■□□□□ 0.2
CCS-208ENST00000533244 SCGNO76038 276 aa16.3■□□□□ 0.2
CCS-208ENST00000533244 IDNKQ5T6J7 187 aa16.3■□□□□ 0.2
CCS-208ENST00000533244 MOB3BQ86TA1 216 aa16.3■□□□□ 0.2
CCS-208ENST00000533244 Q8N6K4 173 aa16.3■□□□□ 0.2
CCS-208ENST00000533244 OR2AK2Q8NG84 335 aa16.3■□□□□ 0.2
CCS-208ENST00000533244 OR5H6Q8NGV6 325 aa16.3■□□□□ 0.2
CCS-208ENST00000533244 MOB4Q9Y3A3 225 aa16.3■□□□□ 0.2
CCS-208ENST00000533244 A0A075B6Q4 140 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 M0QZK8 103 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 IGKV1D-33P01593 117 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 IGKV1-33P01594 117 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 LPLP06858 475 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 CD1BP29016 333 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 RPS19P39019 145 aaKnown RBP16.29■□□□□ 0.2
CCS-208ENST00000533244 LSM3P62310 102 aaKnown RBP16.29■□□□□ 0.2
CCS-208ENST00000533244 MRPS15P82914 257 aaKnown RBP16.29■□□□□ 0.2
CCS-208ENST00000533244 HERPUD1Q15011 391 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 SRSF7Q16629 238 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCS-208ENST00000533244 PRR31Q5SQ13 230 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 Q6ZS49 121 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 ZNF833PQ6ZTB9 187 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 CROCCP3Q8IVE0 287 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 KLHDC1Q8N7A1 406 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 WIPF2Q8TF74 440 aaPredicted RBP16.29■□□□□ 0.2
CCS-208ENST00000533244 WNT10AQ9GZT5 417 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 PARP12Q9H0J9 701 aaKnown RBP16.29■□□□□ 0.2
CCS-208ENST00000533244 OR1A1Q9P1Q5 309 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 SLC23A1Q9UHI7 598 aa16.29■□□□□ 0.2
CCS-208ENST00000533244 ELF5Q9UKW6 265 aaPredicted RBP16.29■□□□□ 0.2
CCS-208ENST00000533244 IGHV3-72A0A0B4J1Y9 119 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 TMEM11P17152 192 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 ZBTB25P24278 435 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 CDNFQ49AH0 187 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 OR4A4PQ8NGN8 299 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 EAF1Q96JC9 268 aaPredicted RBP16.28■□□□□ 0.2
CCS-208ENST00000533244 AGMATQ9BSE5 352 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 CABLES2Q9BTV7 478 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 TOLLIPQ9H0E2 274 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 SPATA2Q9UM82 520 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 PKD1L1Q8TDX9 2849 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 SAA2-SAA4A0A096LPE2 208 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 FABP7O15540 132 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 FGF16O43320 207 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 DIRAS3O95661 229 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 GSTP1P09211 210 aaKnown RBP16.28■□□□□ 0.2
CCS-208ENST00000533244 SAA2P0DJI9 122 aaPredicted RBP16.28■□□□□ 0.2
CCS-208ENST00000533244 HES1Q14469 280 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 KIR2DS1Q14954 304 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 ZNF260Q3ZCT1 412 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 HACD4Q5VWC8 232 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 FAM71F2Q6NXP2 309 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 ZNF251Q9BRH9 671 aa16.28■□□□□ 0.2
CCS-208ENST00000533244 MRPS26Q9BYN8 205 aaKnown RBP16.28■□□□□ 0.2
CCS-208ENST00000533244 MGAM2Q2M2H8 2515 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 ZNF736B4DX44 427 aaPredicted RBP16.27■□□□□ 0.19
CCS-208ENST00000533244 ST8SIA5O15466 376 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 DTYMKP23919 212 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 CEACAM6P40199 344 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 NCS1P62166 190 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 LSAMPQ13449 338 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 ARFRP1Q13795 201 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 ABCA11PQ4W5N1 156 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 C5orf56Q8N8D9 126 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 OR2T10Q8NGZ9 312 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 EDARADDQ8WWZ3 215 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 PIPOXQ9P0Z9 390 aa16.27■□□□□ 0.19
CCS-208ENST00000533244 ZNF230Q9UIE0 474 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms