RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 FAM216BQ8N7L0 139 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 TPRX1Q8N7U7 411 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 COQ8AQ8NI60 647 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 SECTM1Q8WVN6 248 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 RTN4IP1Q8WWV3 396 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-208ENST00000533123 PERPQ96FX8 193 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 GAFA1Q96PS6 74 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 RSRP1Q9BUV0 290 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 MBNL3Q9NUK0 354 aaKnown RBP15.35■□□□□ 0.05
SMPD1-208ENST00000533123 KIAA2026Q5HYC2 2103 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 C13orf42A0A1B0GVH6 325 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 TMEM30CPA0ZSE6 113 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 MPTX1A8MV57 137 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 TUSC2O75896 110 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 DIRAS3O95661 229 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 IGHV2-70P01814 119 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 UCP3P55916 312 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 TMEM33P57088 247 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 SP6Q3SY56 376 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 LDLRAD3Q86YD5 345 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 SDSLQ96GA7 329 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 CABLES2Q9BTV7 478 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 ZNF665Q9H7R5 613 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 SEBOXQ9HB31 216 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-208ENST00000533123 TRBV6-7A0A0A0MS04 114 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 TRAV14DV4A0A0A6YYC5 116 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 MEX3AA1L020 520 aaKnown RBP15.34■□□□□ 0.05
SMPD1-208ENST00000533123 TSPAN4O14817 238 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 CTXN2P0C2S0 81 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 GNRHRP30968 328 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 LRRC37A5PQ49AS3 106 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 ZNF561Q8N587 486 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 OR10J5Q8NHC4 309 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 RAB1CQ92928 201 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 TIMD4Q96H15 378 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 TAF9BQ9HBM6 251 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 PCDHB10Q9UN67 800 aa15.34■□□□□ 0.05
SMPD1-208ENST00000533123 FXYD6-FXYD2A0A087WZ82 144 aa15.33■□□□□ 0.05
SMPD1-208ENST00000533123 C5orf51A6NDU8 294 aa15.33■□□□□ 0.05
SMPD1-208ENST00000533123 L7N2F9 121 aa15.33■□□□□ 0.05
SMPD1-208ENST00000533123 TNFRSF13BO14836 293 aaPredicted RBP15.33■□□□□ 0.05
SMPD1-208ENST00000533123 SRSF4Q08170 494 aaKnown RBP15.33■□□□□ 0.05
SMPD1-208ENST00000533123 GPHA2Q96T91 129 aa15.33■□□□□ 0.05
SMPD1-208ENST00000533123 NAA60Q9H7X0 242 aa15.33■□□□□ 0.05
SMPD1-208ENST00000533123 A0A0B4J2A0 478 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 K7N7A8 449 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 ADAM20O43506 726 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 OR5AC1P0C628 307 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 GLIPR1P48060 266 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 KCNJ3P48549 501 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 HMGN3Q15651 99 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 TUSC1Q2TAM9 212 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 H1FOOQ8IZA3 346 aaPredicted RBP15.33■□□□□ 0.04
SMPD1-208ENST00000533123 ASB13Q8WXK3 278 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 SNX22Q96L94 193 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 MED9Q9NWA0 146 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 SHPKQ9UHJ6 478 aa15.33■□□□□ 0.04
SMPD1-208ENST00000533123 NMBP08949 121 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 EDDM3AQ14507 147 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 KRBOX4Q5JUW0 171 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 SLC35E4Q6ICL7 350 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 ZNF818PQ6ZRF7 136 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 FGFRL1Q8N441 504 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 CXorf58Q96LI9 332 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 SLC5A7Q9GZV3 580 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 NKX6-3A6NJ46 265 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 SIGLEC5O15389 551 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 ARPC5O15511 151 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 HOXB5P09067 269 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 GPR6P46095 362 aaPredicted RBP15.32■□□□□ 0.04
SMPD1-208ENST00000533123 ZNF565Q8N9K5 539 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 OR1L1Q8NH94 360 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 MRGPRDQ8TDS7 321 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 PPP1R1CQ8WVI7 109 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 PARP12Q9H0J9 701 aaKnown RBP15.32■□□□□ 0.04
SMPD1-208ENST00000533123 RAB18Q9NP72 206 aa15.32■□□□□ 0.04
SMPD1-208ENST00000533123 POM121CA8CG34 1229 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 C12orf77C9JDV5 145 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 HSD17B6O14756 317 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 FSTL3O95633 263 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 NUP62P37198 522 aaPredicted RBP15.31■□□□□ 0.04
SMPD1-208ENST00000533123 BTN1A1Q13410 526 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 FAM53AQ6NSI3 398 aaPredicted RBP15.31■□□□□ 0.04
SMPD1-208ENST00000533123 GSG1LQ6UXU4 331 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 FAM219AQ8IW50 185 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 AIFM2Q9BRQ8 373 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 DCTN5Q9BTE1 182 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 DNTTIP1Q9H147 329 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 METTL8Q9H825 291 aaKnown RBP15.31■□□□□ 0.04
SMPD1-208ENST00000533123 CCL28Q9NRJ3 127 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 CTSZQ9UBR2 303 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 NDUFA2O43678 99 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 FCN3O75636 299 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 SNAPC5O75971 98 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 FAM122CQ6P4D5 195 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 PPP1R35Q8TAP8 253 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 OR10C1Q96KK4 312 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 OR2W1Q9Y3N9 320 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 MED13LQ71F56 2210 aa15.31■□□□□ 0.04
SMPD1-208ENST00000533123 NPIPB11E5RHQ5 1161 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms