RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 A0A1W2PPE3 182 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 MEIS3P1A6NDR6 274 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 BET1O15155 118 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 FABP7O15540 132 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 SSX5O60225 188 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 RGS11O94810 467 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 SCTP09683 121 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 PRSS3P35030 304 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 PPP1CCP36873 323 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 CBX5P45973 191 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 RNASE12Q5GAN4 147 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 PRR31Q5SQ13 230 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 MINOS1Q5TGZ0 78 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 Q6ZPA2 131 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 LIAT1Q6ZQX7 453 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 OR52M1Q8NGK5 317 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 OR10X1Q8NGY0 326 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 OR9G1Q8NH87 305 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 LINC01006Q8NI28 216 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 SSX3Q99909 188 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 MIXL1Q9H2W2 232 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 MMP27Q9H306 513 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 RAB18Q9NP72 206 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 BATF3Q9NR55 127 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 SLC23A1Q9UHI7 598 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 JPT1Q9UK76 154 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 PSG11Q9UQ72 335 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 MINOS1-NBL1R4GNA1 71 aa10.46□□□□□ -0.73
TRAPPC4-212ENST00000533058 DSCAML1Q8TD84 2053 aa10.46□□□□□ -0.74
TRAPPC4-212ENST00000533058 NBEAL1Q6ZS30 2694 aa10.46□□□□□ -0.74
TRAPPC4-212ENST00000533058 H3BUX3 64 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 GSTT2P0CG29 244 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 GSTT2BP0CG30 244 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 HTR1DP28221 377 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 CD34P28906 385 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 DYNLT3P51808 116 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 ARPC4P59998 168 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 HTD2P86397 168 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 IL18Q14116 193 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 GNMTQ14749 295 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 UTF1Q5T230 341 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 STEAP3Q658P3 488 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 DHRS7BQ6IAN0 325 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 FAM53AQ6NSI3 398 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 Q6ZSV7 163 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 LHFPL4Q7Z7J7 247 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 OR4A4PQ8NGN8 299 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 PIFOQ8TCI5 191 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 WFDC12Q8WWY7 111 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 GINS4Q9BRT9 223 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 AMMECR1Q9Y4X0 333 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 HILPDAQ9Y5L2 63 aa10.45□□□□□ -0.74
TRAPPC4-212ENST00000533058 A0A087X0M5 115 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 A0A1B0GX30 115 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 A6NHS1 94 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 J3QR06 171 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 HLA-DQB1P01920 261 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 ZBTB25P24278 435 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 CEACAM3P40198 252 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 CEACAM6P40199 344 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 LOXL3P58215 753 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 PROK1P58294 105 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 HLA-DRB5Q30154 266 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 PLA1AQ53H76 456 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 GVQW1Q8N7I0 195 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 BEST4Q8NFU0 473 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 OR10J5Q8NHC4 309 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 C15orf40Q8WUR7 153 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 CREB3L1Q96BA8 519 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 CITED1Q99966 193 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 OCSTAMPQ9BR26 566 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 NXF2Q9GZY0 626 aaKnown RBP10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 MMP28Q9H239 520 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 OR1A1Q9P1Q5 309 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 DPM3Q9P2X0 92 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 RNF114Q9Y508 228 aa10.44□□□□□ -0.74
TRAPPC4-212ENST00000533058 LEUTXA8MZ59 168 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 LPLP06858 475 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 IL3RAP26951 378 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 TNFSF8P32971 234 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 SSX2Q16385 188 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 SRSF7Q16629 238 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 MORN2Q502X0 79 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 IGSF11Q5DX21 431 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 LDLRAD2Q5SZI1 272 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 C11orf88Q6PI97 169 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 FAM131AQ6UXB0 335 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 HOGA1Q86XE5 327 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 DYNAPQ8N1N2 210 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 OR2AK2Q8NG84 335 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 OR4P4Q8NGL7 312 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 RPEQ96AT9 228 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 RANBP3Q9H6Z4 567 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 RBM7Q9Y580 266 aaKnown RBP10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 A3GALT2U3KPV4 340 aa10.43□□□□□ -0.74
TRAPPC4-212ENST00000533058 MGAM2Q2M2H8 2515 aa10.42□□□□□ -0.74
TRAPPC4-212ENST00000533058 IGKV1D-8A0A087WSZ0 117 aa10.42□□□□□ -0.74
TRAPPC4-212ENST00000533058 IGKV1-6A0A0C4DH72 117 aa10.42□□□□□ -0.74
TRAPPC4-212ENST00000533058 FABP12A6NFH5 140 aa10.42□□□□□ -0.74
TRAPPC4-212ENST00000533058 BUB1B-PAK6H3BSN5 160 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms