RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 LY6G6FQ5SQ64 297 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 Q8N402 240 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 SIGLECL1Q8N7X8 197 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 C8orf31Q8N9H6 132 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR10X1Q8NGY0 326 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 YPEL2Q96QA6 119 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 SLC6A7Q99884 636 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 MMP28Q9H239 520 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 SCPEP1Q9HB40 452 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 IFT46Q9NQC8 304 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 DPM3Q9P2X0 92 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 SLC23A1Q9UHI7 598 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 AMMECR1Q9Y4X0 333 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 WNK2Q9Y3S1 2297 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 A0A1W2PPE3 182 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 BUB1B-PAK6H3BSN5 160 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 SULT1C2O00338 296 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 BET1O15155 118 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 LPLP06858 475 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 PPP1CCP36873 323 aaKnown RBP9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 MADCAM1Q13477 382 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 ZNF79Q15937 498 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 SSX2Q16385 188 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 HLA-DRB5Q30154 266 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 IGSF11Q5DX21 431 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 UTF1Q5T230 341 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 FAM53AQ6NSI3 398 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 LHFPL4Q7Z7J7 247 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 HOGA1Q86XE5 327 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 LINC00311Q8N616 119 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 GVQW1Q8N7I0 195 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 DRAXINQ8NBI3 349 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 BEST4Q8NFU0 473 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR4P4Q8NGL7 312 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR10J5Q8NHC4 309 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 ENKURQ8TC29 256 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 ZNF48Q96MX3 618 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 JMJD8Q96S16 334 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 C7orf50Q9BRJ6 194 aaKnown RBP9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 PRDM13Q9H4Q3 707 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 ANXA10Q9UJ72 324 aa9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 TEP1Q99973 2627 aaKnown RBP9.12□□□□□ -0.95
TRAPPC4-211ENST00000533012 IGKV1D-8A0A087WSZ0 117 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 A0A0A6YYJ9 748 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 IGKV1-6A0A0C4DH72 117 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 MDFIC2A0A1B0GVS7 189 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 MEIS3P1A6NDR6 274 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 TCF21O43680 179 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 DIRAS3O95661 229 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 FCER2P06734 321 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 IL3RAP26951 378 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 ZNF134P52741 427 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 AP3S2P59780 193 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 BAMBIQ13145 260 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 GNMTQ14749 295 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 CT45A1Q5HYN5 189 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 CCBE1Q6UXH8 406 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 Q6YL49 198 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 SLC25A48Q6ZT89 311 aaKnown RBP9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 ZNF439Q8NDP4 499 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR2AK2Q8NG84 335 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 CT45A3Q8NHU0 189 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 GPX8Q8TED1 209 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 C17orf50Q8WW18 174 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 FCAMRQ8WWV6 532 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 EDARADDQ8WWZ3 215 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 GCDHQ92947 438 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 ABHD1Q96SE0 405 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 SOSTQ9BQB4 213 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 GINS4Q9BRT9 223 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 MEGF9Q9H1U4 602 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR1A1Q9P1Q5 309 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 HILPDAQ9Y5L2 63 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 MTORP42345 2549 aa9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 NIPBLQ6KC79 2804 aaeCLIP9.11□□□□□ -0.95
TRAPPC4-211ENST00000533012 SONP18583 2426 aaKnown RBP9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 TRBV6-7A0A0A0MS04 114 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 OOSP1A8MZH6 123 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 LY6LH3BQJ8 138 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 ITGB1BP1O14713 200 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 CTDSPLO15194 276 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 RBBP9O75884 186 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 TRAPPC2P0DI81 140 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 TRAPPC2BP0DI82 140 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 RAB7AP51149 207 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 ARHGDIBP52566 201 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 ARPC4P59998 168 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 HERPUD1Q15011 391 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 LDLRAD2Q5SZI1 272 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 TPTE2P1Q5T6R2 138 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 PLET1Q6UQ28 207 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 CHAC2Q8WUX2 184 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 DEDD2Q8WXF8 326 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 RPEQ96AT9 228 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 AJUBAQ96IF1 538 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 SDHCQ99643 169 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 CABLES2Q9BTV7 478 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 ABHD14AQ9BUJ0 271 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 TOLLIPQ9H0E2 274 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms