RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SLURP1P55000 103 aa14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 FAM27D1Q5T7N8 215 aa14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 MRPL30Q8TCC3 161 aaKnown RBP14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 DLX4Q92988 240 aaPredicted RBP14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 MRPS24Q96EL2 167 aaKnown RBP14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 PGLYRP3Q96LB9 341 aa14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 RDH12Q96NR8 316 aa14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 MBNL3Q9NUK0 354 aaKnown RBP14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 DIMT1Q9UNQ2 313 aaKnown RBP14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 FBXO7Q9Y3I1 522 aa14.27□□□□□ -0.13
SSSCA1-206ENST00000531405 TRBV5-7A0A0A0MS05 114 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 SPNP16150 400 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 MYL12AP19105 171 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 FUT3P21217 361 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 NDPQ00604 133 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 ECSCRQ19T08 205 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 C5orf64Q2M2E5 130 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 YIF1BQ5BJH7 314 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 ZNF429Q86V71 674 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 FAM46BQ96A09 425 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 Q96M66 194 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 KCNIP1Q9NZI2 227 aa14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 EXOSC1Q9Y3B2 195 aaKnown RBP14.26□□□□□ -0.13
SSSCA1-206ENST00000531405 STARD9Q9P2P6 4700 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 SAA2-SAA4A0A096LPE2 208 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 SOX15O60248 233 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 CA11O75493 328 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 FRMD6-AS1P0C7T7 363 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 SAA2P0DJI9 122 aaPredicted RBP14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 GABPB1Q06547 395 aaPredicted RBP14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 LIN54Q6MZP7 749 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 ZNF833PQ6ZTB9 187 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 MINDY2Q8NBR6 621 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 ZNF555Q8NEP9 628 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 S100A14Q9HCY8 104 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 GAR1Q9NY12 217 aaKnown RBP14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 JPT1Q9UK76 154 aa14.25□□□□□ -0.13
SSSCA1-206ENST00000531405 A0A1W2PN81 502 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 FAM90A7PA6NKC0 464 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 FAM90A23PA8MXZ1 464 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 BAG2O95816 211 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 CHRNA7P36544 502 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 C19orf54Q5BKX5 351 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 LYPD6Q86Y78 171 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 PQLC1Q8N2U9 271 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 ZNF485Q8NCK3 441 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 NPBQ8NG41 125 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 KIAA1456Q9P272 454 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 A3GALT2U3KPV4 340 aa14.24□□□□□ -0.13
SSSCA1-206ENST00000531405 IGHV4OR15-8A0A075B7B6 117 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 A0A087WW49 117 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 IRGMA1A4Y4 181 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 TRIM64CA6NLI5 447 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 LINC01619G3V211 115 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 YPEL1O60688 119 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 PDCD6O75340 191 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 NDUFA3O95167 84 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 GP9P14770 177 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 CAPGP40121 348 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 HTD2P86397 168 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 FAM131AQ6UXB0 335 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 ARPC1AQ92747 370 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 TMEM80Q96HE8 168 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 DERL3Q96Q80 235 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 YPEL2Q96QA6 119 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 TOLLIPQ9H0E2 274 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 FBXL15Q9H469 300 aa14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 SMPD3Q9NY59 655 aaPredicted RBP14.23□□□□□ -0.13
SSSCA1-206ENST00000531405 EPPK1P58107 5090 aaKnown RBP14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 DNAH1Q9P2D7 4330 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 GLAP06280 429 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 DOC2BQ14184 412 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 LRRC36Q1X8D7 754 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 C6orf141Q5SZD1 244 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 ZNF554Q86TJ5 538 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 OR2AK2Q8NG84 335 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 GALMQ96C23 342 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 SULT4A1Q9BR01 284 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 CST11Q9H112 138 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 IFI27L2Q9H2X8 130 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 TPSG1Q9NRR2 321 aa14.22□□□□□ -0.13
SSSCA1-206ENST00000531405 TNCP24821 2201 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 FCN1O00602 326 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 ST8SIA5O15466 376 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 RGS11O94810 467 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 IGHV3-11P01762 117 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 LGALS1P09382 135 aaKnown RBP14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 SNRPBP14678 240 aaKnown RBP14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 RPL39P5Q59GN2 51 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 ACSM6Q6P461 480 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 GLDNQ6ZMI3 551 aaPredicted RBP14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 HAPLN4Q86UW8 402 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 CDH26Q8IXH8 852 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 ABHD5Q8WTS1 349 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 IL1F10Q8WWZ1 152 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 CHCHD3Q9NX63 227 aaKnown RBP14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 GAB2Q9UQC2 676 aa14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 FOXA2Q9Y261 457 aaPredicted RBP14.21□□□□□ -0.13
SSSCA1-206ENST00000531405 EGR2P11161 476 aaPredicted RBP14.2□□□□□ -0.14
SSSCA1-206ENST00000531405 LYL1P12980 280 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms