RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 HLA-DRB3P79483 266 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 MRPS15P82914 257 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 HABP2Q14520 560 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 ARL6IP1Q15041 203 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 FBLN7Q53RD9 439 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 CROCCP3Q8IVE0 287 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 Q8N2B8 174 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 OR5H6Q8NGV6 325 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 OR56B4Q8NH76 319 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 CAPSLQ8WWF8 208 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 RTN4IP1Q8WWV3 396 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 RBM14Q96PK6 669 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 MRPS26Q9BYN8 205 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 ZNF702PQ9H963 129 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.14□□□□□ -0.793e-11■■■■■ 43.7
CCDC90B-216ENST00000529856 RHBDL2Q9NX52 303 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 SIGLEC9Q9Y336 463 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 ETV7Q9Y603 341 aa10.14□□□□□ -0.79
CCDC90B-216ENST00000529856 TRDCB7Z8K6 153 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 LANCL1O43813 399 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 SCGNO76038 276 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 LPLP06858 475 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 SNRNP70P08621 437 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 FCGR3AP08637 254 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 KRTAP10-3P60369 221 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 BLCAPP62952 87 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 SRSF4Q08170 494 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 ARFRP1Q13795 201 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 EBI3Q14213 229 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 CDNFQ49AH0 187 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 MOB3BQ86TA1 216 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 ODF3L1Q8IXM7 274 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 LYG1Q8N1E2 194 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 OR2AK2Q8NG84 335 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 OR2T6Q8NHC8 308 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 SLC25A38Q96DW6 304 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 AKR1E2Q96JD6 320 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 SLC25A33Q9BSK2 321 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 ABHD14AQ9BUJ0 271 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 PRSS22Q9GZN4 317 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 SPATA2Q9UM82 520 aa10.13□□□□□ -0.79
CCDC90B-216ENST00000529856 IGKV1-6A0A0C4DH72 117 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 ITGB1BP1O14713 200 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 TXNL1O43396 289 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 TFAP2AP05549 437 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 ZBTB25P24278 435 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 CD1BP29016 333 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 TALDO1P37837 337 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 CEACAM6P40199 344 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 ALDH3B2P48448 385 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 NCS1P62166 190 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 SRSF7Q16629 238 aaKnown RBP eCLIP10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 ZNF260Q3ZCT1 412 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 C11orf88Q6PI97 169 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 Q6ZS46 218 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 ANKRD13BQ86YJ7 626 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 TGIF2LXQ8IUE1 241 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 OR4A4PQ8NGN8 299 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 CITED1Q99966 193 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 SLC23A1Q9UHI7 598 aa10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 ELF5Q9UKW6 265 aaPredicted RBP10.12□□□□□ -0.79
CCDC90B-216ENST00000529856 IGHV3-72A0A0B4J1Y9 119 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 M0QZK8 103 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 FABP7O15540 132 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 HSPA12AO43301 675 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 AMY1AP04745 511 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 AMY2AP04746 511 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 GSTP1P09211 210 aaKnown RBP10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 GSTT2P0CG29 244 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 GSTT2BP0CG30 244 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 TMEM11P17152 192 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 SERPINB10P48595 397 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 VBP1P61758 197 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 HES1Q14469 280 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 HNF4GQ14541 408 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 KIR2DS1Q14954 304 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 PNLIPRP3Q17RR3 467 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 HACD4Q5VWC8 232 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 Q6ZS49 121 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 IZUMO1Q8IYV9 350 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 SGMS2Q8NHU3 365 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 SLC25A46Q96AG3 418 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 PARP12Q9H0J9 701 aaKnown RBP10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 C11orf54Q9H0W9 315 aaPredicted RBP10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 IFI27L2Q9H2X8 130 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 GHITMQ9H3K2 345 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 SERTAD4Q9NUC0 356 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 OR1A1Q9P1Q5 309 aa10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 ZNF230Q9UIE0 474 aaPredicted RBP10.11□□□□□ -0.79
CCDC90B-216ENST00000529856 A0A0A6YYH2 397 aa10.1□□□□□ -0.79
CCDC90B-216ENST00000529856 A6NJ64 397 aa10.1□□□□□ -0.79
CCDC90B-216ENST00000529856 ZNF736B4DX44 427 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-216ENST00000529856 ST8SIA5O15466 376 aa10.1□□□□□ -0.79
CCDC90B-216ENST00000529856 DIRAS3O95661 229 aa10.1□□□□□ -0.79
CCDC90B-216ENST00000529856 DTYMKP23919 212 aa10.1□□□□□ -0.79
CCDC90B-216ENST00000529856 OR3A3P47888 321 aa10.1□□□□□ -0.79
CCDC90B-216ENST00000529856 PITPNAQ00169 270 aa10.1□□□□□ -0.79
CCDC90B-216ENST00000529856 HERPUD1Q15011 391 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms