RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TMEM212A6NML5 194 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 SNTNA6NMZ2 147 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 GEMIN2O14893 280 aaKnown RBP6.88□□□□□ -1.31
VPS11-203ENST00000529545 SOX15O60248 233 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 ZNF780AO75290 641 aaPredicted RBP6.88□□□□□ -1.31
VPS11-203ENST00000529545 RGS11O94810 467 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 HBZP02008 142 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 CD2P06729 351 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 GSTP1P09211 210 aaKnown RBP6.88□□□□□ -1.31
VPS11-203ENST00000529545 SERPINA2P20848 420 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 CNTFRP26992 372 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 ADMP35318 185 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 CRIP2P52943 208 aaPredicted RBP6.88□□□□□ -1.31
VPS11-203ENST00000529545 MRPL28Q13084 256 aaKnown RBP6.88□□□□□ -1.31
VPS11-203ENST00000529545 TATDN3Q17R31 274 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 LRRC36Q1X8D7 754 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 UNQ5815/PRO19632Q6UWF5 114 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 PPP1R27Q86WC6 154 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 C10orf67Q8IYJ2 551 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 DDB2Q92466 427 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 RITA1Q96K30 269 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 NABP2Q9BQ15 211 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 ABHD14AQ9BUJ0 271 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 MRPL20Q9BYC9 149 aaKnown RBP6.88□□□□□ -1.31
VPS11-203ENST00000529545 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 IMPAD1Q9NX62 359 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 IL36GQ9NZH8 169 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 KCNIP1Q9NZI2 227 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 ZNF581Q9P0T4 197 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 TNCP24821 2201 aa6.88□□□□□ -1.31
VPS11-203ENST00000529545 C13orf42A0A1B0GVH6 325 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 SHISA3A0PJX4 238 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 NDUFA3O95167 84 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 LY6G6CO95867 125 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 TRGV3P03979 118 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 TFAP2AP05549 437 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 GTF2F2P13984 249 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 PPP3R1P63098 170 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 GNGT1P63211 74 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 CX3CL1P78423 397 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 ID3Q02535 119 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 GPR176Q14439 515 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 MOGAT2Q3SYC2 334 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 MORN2Q502X0 79 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 AKIRIN2Q53H80 203 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 C19orf54Q5BKX5 351 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 RNLSQ5VYX0 342 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 CD200R1LQ6Q8B3 271 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 Q8N402 240 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 OR51A2Q8NGJ7 313 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 OR4K15Q8NH41 348 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 OR1L1Q8NH94 360 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 TRUB1Q8WWH5 349 aaKnown RBP6.87□□□□□ -1.31
VPS11-203ENST00000529545 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 MRPS24Q96EL2 167 aaKnown RBP6.87□□□□□ -1.31
VPS11-203ENST00000529545 RHOVQ96L33 236 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 CIB1Q99828 191 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 FAM110AQ9BQ89 295 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 HIPK2Q9H2X6 1198 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 FBXL15Q9H469 300 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 RETNQ9HD89 108 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 ZNF355PQ9NSJ1 428 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 ETAA1Q9NY74 926 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 CNOT2Q9NZN8 540 aaKnown RBP6.87□□□□□ -1.31
VPS11-203ENST00000529545 FBXO7Q9Y3I1 522 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 NUBP2Q9Y5Y2 271 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 CEPT1Q9Y6K0 416 aa6.87□□□□□ -1.31
VPS11-203ENST00000529545 A0A0G2JLM5 398 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 RRHO14718 337 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 CA11O75493 328 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 TPPPO94811 219 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 T-ENOLP0DO92 83 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 FASP25445 335 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 ZNF93P35789 620 aaPredicted RBP6.86□□□□□ -1.31
VPS11-203ENST00000529545 POLR2IP36954 125 aaKnown RBP6.86□□□□□ -1.31
VPS11-203ENST00000529545 SOX2P48431 317 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 GBX2P52951 348 aaPredicted RBP6.86□□□□□ -1.31
VPS11-203ENST00000529545 NDPQ00604 133 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 ATP6AP1Q15904 470 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 DNAL1Q4LDG9 190 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 SLC22A6Q4U2R8 563 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 DDI2Q5TDH0 399 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 MEDAGQ5VYS4 303 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 ZNF529Q6P280 563 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 SYS1Q8N2H4 156 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 OR9G4Q8NGQ1 327 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 PDCD1LG2Q9BQ51 273 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 ALG8Q9BVK2 526 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 GABARAPL1Q9H0R8 117 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 TAF9BQ9HBM6 251 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 TMEM138Q9NPI0 162 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 TAS2R4Q9NYW5 299 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 JPT1Q9UK76 154 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 POMPQ9Y244 141 aa6.86□□□□□ -1.31
VPS11-203ENST00000529545 ANKRD34BA5PLL1 514 aa6.85□□□□□ -1.31
VPS11-203ENST00000529545 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.85□□□□□ -1.31
VPS11-203ENST00000529545 H7C2Y5 167 aa6.85□□□□□ -1.31
VPS11-203ENST00000529545 J3QRE1 110 aa6.85□□□□□ -1.31
VPS11-203ENST00000529545 FCN1O00602 326 aa6.85□□□□□ -1.31
VPS11-203ENST00000529545 GYG2O15488 501 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms