RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 MBD2Q9UBB5 411 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF107Q9UII5 783 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-212ENST00000529046 RPUSD1Q9UJJ7 312 aaKnown RBP3.48□□□□□ -1.85
CSDE1-212ENST00000529046 MPC1Q9Y5U8 109 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 ARHGAP32A7KAX9 2087 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 AGRNO00468 2067 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 GGT3PA6NGU5 568 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 ANKRD30BLA7E2S9 258 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF878C9JN71 531 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 RNASEK-C17orf49H0YIS7 233 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-212ENST00000529046 L7N2F9 121 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 ATP8B1O43520 1251 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 OR10H3O60404 316 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 FCN3O75636 299 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 CIB2O75838 187 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 CST4P01036 141 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 FABP3P05413 133 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 FBP1P09467 338 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 RRM2P31350 389 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 FMO3P31513 532 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 NUDT2P50583 147 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 UBE2E1P51965 193 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 PRRX1P54821 245 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 ACTR3P61158 418 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 FAM3AP98173 230 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 IL5RAQ01344 420 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 OR8B8Q15620 311 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 LRRC10Q5BKY1 277 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 SAMD4BQ5PRF9 694 aaKnown RBP3.47□□□□□ -1.85
CSDE1-212ENST00000529046 FAM201AQ5SY85 155 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 GLYATL3Q5SZD4 288 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 PRAMEF6Q5VXH4 476 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 FAM159AQ6UWV7 190 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 BRD3OSQ6XYD6 125 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 DCXRQ7Z4W1 244 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 PGAM4Q8N0Y7 254 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 OR1M1Q8NGA1 313 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 OR52L1Q8NGH7 329 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 OR4K13Q8NH42 304 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 RNF133Q8WVZ7 376 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 MCUR1Q96AQ8 359 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 SGK3Q96BR1 496 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 SLAMF6Q96DU3 332 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 NIPAL2Q9H841 368 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 WDR76Q9H967 626 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 NRN1Q9NPD7 142 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 UFSP2Q9NUQ7 469 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 C1orf123Q9NWV4 160 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 RASL12Q9NYN1 266 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 ZNRD1Q9P1U0 126 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 VPREB3Q9UKI3 123 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 SOX21Q9Y651 276 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-212ENST00000529046 CDH10Q9Y6N8 788 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 COMMD3-BMI1R4GMX3 469 aa3.47□□□□□ -1.85
CSDE1-212ENST00000529046 MDFIC2A0A1B0GVS7 189 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 DHRS12A0PJE2 317 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 BTBD17A6NE02 478 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 ARRDC5A6NEK1 342 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 TMEM210A6NLX4 147 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 ZNF593O00488 134 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-212ENST00000529046 E2F6O75461 281 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 GYPAP02724 150 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 RRASP10301 218 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 NCK1P16333 377 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 SPI1P17947 270 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 PAICSP22234 425 aaKnown RBP3.46□□□□□ -1.86
CSDE1-212ENST00000529046 OMGP23515 440 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 SAA4P35542 130 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 RBMXP38159 391 aaKnown RBP3.46□□□□□ -1.86
CSDE1-212ENST00000529046 KIR2DS4P43632 304 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 MNAT1P51948 309 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 MFAP2P55001 183 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 ATP5IP56385 69 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-212ENST00000529046 ARF6P62330 175 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 RCN1Q15293 331 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 MICAQ29983 383 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 KPRPQ5T749 579 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-212ENST00000529046 LINC01590Q5TEZ4 76 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 STUMQ69YW2 141 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 DEGS2Q6QHC5 323 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 WDR82Q6UXN9 313 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 ADAMTSL5Q6ZMM2 481 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 DPY19L4Q7Z388 723 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 VMO1Q7Z5L0 202 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 CALHM1Q8IU99 346 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 Q8N7P7 452 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 SDR9C7Q8NEX9 313 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 PROKR2Q8NFJ6 384 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 OR2T33Q8NG76 320 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 OR5D13Q8NGL4 314 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 OR8S1Q8NH09 359 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 OR52J3Q8NH60 311 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 OR2AE1Q8NHA4 323 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 TMEM37Q8WXS4 190 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 DLX4Q92988 240 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-212ENST00000529046 LHX4Q969G2 390 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 CCT8L2Q96SF2 557 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms