RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 ADARB1P78563 741 aaKnown RBP12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 TNFRSF9Q07011 255 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 RSU1Q15404 277 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 FAM71F2Q6NXP2 309 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 UNQ5815/PRO19632Q6UWF5 114 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 DEFB125Q8N687 156 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 LFNGQ8NES3 379 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 OR10V1Q8NGI7 309 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 OR52N1Q8NH53 320 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 OR1L1Q8NH94 360 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 RGP1Q92546 391 aaPredicted RBP12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 PELI1Q96FA3 418 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 ABHD14AQ9BUJ0 271 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 MBNL3Q9NUK0 354 aaKnown RBP12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 ADAM30Q9UKF2 790 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 A3GALT2U3KPV4 340 aa12.22□□□□□ -0.45
CHMP4A-203ENST00000527154 CXorf65A6NEN9 183 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 MITFO75030 526 aaPredicted RBP12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 FAM107AO95990 144 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 TRGV3P03979 118 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 HTR1AP08908 422 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 FLOT2Q14254 428 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 SYT6Q5T7P8 510 aaPredicted RBP12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 ZNF343Q6P1L6 599 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 ZNF554Q86TJ5 538 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 OR51A2Q8NGJ7 313 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 RDH12Q96NR8 316 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 FAM103A1Q9BTL3 118 aaKnown RBP12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 WFDC10AQ9H1F0 79 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 SRD5A3Q9H8P0 318 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 ZC4H2Q9NQZ6 224 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 SLC23A1Q9UHI7 598 aa12.21□□□□□ -0.45
CHMP4A-203ENST00000527154 A0A0G2JLM5 398 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 SC5DO75845 299 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 HTR3BO95264 441 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 FADS2O95864 444 aaKnown RBP12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 RPSAP08865 295 aaKnown RBP12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 CD40LGP29965 261 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 C6orf183Q5T699 404 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 KDM4DQ6B0I6 523 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 TRAT1Q6PIZ9 186 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 POC5Q8NA72 575 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 CCDC197Q8NCU1 140 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 RNF5Q99942 180 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 SLC2A8Q9NY64 477 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 JPT1Q9UK76 154 aa12.2□□□□□ -0.46
CHMP4A-203ENST00000527154 SAA2-SAA4A0A096LPE2 208 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 TCRBV3S1A0A5B6 114 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 CDRT1O95170 752 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 SAA2P0DJI9 122 aaPredicted RBP12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 RCC1P18754 421 aaPredicted RBP12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 SSBP2P81877 361 aaPredicted RBP12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 PMS2P11Q13670 270 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 GNMTQ14749 295 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 CD300EQ496F6 205 aaPredicted RBP12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 LPCAT4Q643R3 524 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 IFI27L2Q9H2X8 130 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 OR2S2Q9NQN1 319 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 MUC4Q99102 2169 aa12.19□□□□□ -0.46
CHMP4A-203ENST00000527154 OR5H14A6NHG9 310 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 MAGEB3O15480 346 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 AIREO43918 545 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 YPEL1O60688 119 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 TRBV12-3P01733 135 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 MED14OSP0DP75 135 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 SNRPBP14678 240 aaKnown RBP12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 RAB3AP20336 220 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 OR3A3P47888 321 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 HTD2P86397 168 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 OR8J1Q8NGP2 316 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 YPEL2Q96QA6 119 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 JAM3Q9BX67 310 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 SPACA1Q9HBV2 294 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 PEF1Q9UBV8 284 aaKnown RBP12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 TRAPPC2LQ9UL33 140 aa12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 KLK5Q9Y337 293 aaPredicted RBP12.18□□□□□ -0.46
CHMP4A-203ENST00000527154 C13orf42A0A1B0GVH6 325 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 ANKRD34BA5PLL1 514 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 MSGN1A6NI15 193 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 H0YJW9 148 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 CA11O75493 328 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 RBBP9O75884 186 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 CT45A6P0DMU7 189 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 CT45A5P0DMU8 189 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 CT45A7P0DMV0 189 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 ATP6V1E1P36543 226 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 DYRK1AQ13627 763 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 FAM131AQ6UXB0 335 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 STX19Q8N4C7 294 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 OR5AN1Q8NGI8 311 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 GHSRQ92847 366 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 RIBC2Q9H4K1 309 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 TAF9BQ9HBM6 251 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 TP53TG1Q9Y2A0 90 aa12.17□□□□□ -0.46
CHMP4A-203ENST00000527154 HSPG2P98160 4391 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 A0A0J9YWU9 116 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 A0A1B0GVY2 172 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 TMEM212A6NML5 194 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms