RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TMEM30BQ3MIR4 351 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 ZNF660Q6AZW8 331 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-205ENST00000527046 H1FOOQ8IZA3 346 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-205ENST00000527046 TEX29Q8N6K0 151 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 SIGLECL1Q8N7X8 197 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 BEST4Q8NFU0 473 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 IL1F10Q8WWZ1 152 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 PHF21AQ96BD5 680 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 MALSU1Q96EH3 234 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 IFI27L2Q9H2X8 130 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 MTFP1Q9UDX5 166 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 MGAT4AQ9UM21 535 aa8.69□□□□□ -1.02
NEDD8-205ENST00000527046 RBMX2Q9Y388 322 aaKnown RBP8.69□□□□□ -1.02
NEDD8-205ENST00000527046 TBL2Q9Y4P3 447 aaKnown RBP8.69□□□□□ -1.02
NEDD8-205ENST00000527046 CUBNO60494 3623 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 SULT1C2O00338 296 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 ITGB1BP1O14713 200 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 IGLV2-14P01704 120 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 LPLP06858 475 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 TALDO1P37837 337 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 KIR2DS4P43632 304 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 IER3P46695 156 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 RAB13P51153 203 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 PRRX1P54821 245 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 KIR2DS1Q14954 304 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 MINOS1Q5TGZ0 78 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 CCBE1Q6UXH8 406 aaPredicted RBP8.68□□□□□ -1.02
NEDD8-205ENST00000527046 OVCH2Q7RTZ1 564 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 CFHR4Q92496 578 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 RDH8Q9NYR8 311 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 DPM3Q9P2X0 92 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 GNG12Q9UBI6 72 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 SLC23A1Q9UHI7 598 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 MINOS1-NBL1R4GNA1 71 aa8.68□□□□□ -1.02
NEDD8-205ENST00000527046 IGKV1D-13A0A0B4J2D9 117 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 A0A1W2PPI3 338 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 FABP12A6NFH5 140 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 FAM90A9PA6NNJ1 464 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 VGLL3A8MV65 326 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 ST8SIA5O15466 376 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 GSTZ1O43708 216 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-205ENST00000527046 IGHV4-59P01825 116 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 ZNF735P0CB33 412 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 IGKV1-13P0DP09 117 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 ZBTB25P24278 435 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 HTR1DP28221 377 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 CBX5P45973 191 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 OR3A3P47888 321 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 LINC00205P59089 165 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 HILS1P60008 231 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 HABP2Q14520 560 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-205ENST00000527046 SSX2Q16385 188 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 TPTE2P1Q5T6R2 138 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 PYHIN1Q6K0P9 492 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 DHRS11Q6UWP2 260 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 MFSD4AQ8N468 514 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 OR5AP2Q8NGF4 316 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 SMIM4Q8WVI0 70 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 ABHD14BQ96IU4 210 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 HILPDAQ9Y5L2 63 aa8.67□□□□□ -1.02
NEDD8-205ENST00000527046 LEUTXA8MZ59 168 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 ZNF736B4DX44 427 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-205ENST00000527046 GABARAPH6UMI1 98 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 TOR1AO14656 332 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 BET1O15155 118 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 HOXA3O43365 443 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-205ENST00000527046 NFYAP23511 347 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-205ENST00000527046 RFX2P48378 723 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 DYNLT3P51808 116 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 MRPS15P82914 257 aaKnown RBP8.66□□□□□ -1.02
NEDD8-205ENST00000527046 ZNF816Q0VGE8 651 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-205ENST00000527046 SLC9A3R2Q15599 337 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 RNASE12Q5GAN4 147 aaKnown RBP8.66□□□□□ -1.02
NEDD8-205ENST00000527046 ZNF833PQ6ZTB9 187 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 OR4D10Q8NGI6 311 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 GIMAP1Q8WWP7 306 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 SRRQ9GZT4 340 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 RAB9BQ9NP90 201 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 AKIP1Q9NQ31 210 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 RNF150Q9ULK6 438 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 GAB2Q9UQC2 676 aa8.66□□□□□ -1.02
NEDD8-205ENST00000527046 NIPBLQ6KC79 2804 aaeCLIP8.66□□□□□ -1.02
NEDD8-205ENST00000527046 SETD2Q9BYW2 2564 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-205ENST00000527046 SAA2-SAA4A0A096LPE2 208 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 PMP2P02689 132 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 CD74P04233 296 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 CTXN2P0C2S0 81 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 SAA2P0DJI9 122 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-205ENST00000527046 PTBP1P26599 531 aaKnown RBP eCLIP8.65□□□□□ -1.027e-6■□□□□ 9.8
NEDD8-205ENST00000527046 HLA-DMAP28067 261 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 LGALS4P56470 323 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 EIF4EBP1Q13541 118 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-205ENST00000527046 DYRK1AQ13627 763 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 IL18Q14116 193 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 CDK10Q15131 360 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 BAK1Q16611 211 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 AANATQ16613 207 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 RPL39P5Q59GN2 51 aa8.65□□□□□ -1.02
NEDD8-205ENST00000527046 OR10J5Q8NHC4 309 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms