RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 IGHV3-43DP0DP04 118 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 IL3RAP26951 378 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 S100A5P33763 92 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 KIR2DS4P43632 304 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 ARHGDIBP52566 201 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 LOXL3P58215 753 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 GNG2P59768 71 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 HTD2P86397 168 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 KIR2DS1Q14954 304 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 AANATQ16613 207 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 PNLIPRP3Q17RR3 467 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 LRRC75BQ2VPJ9 315 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 CDNFQ49AH0 187 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 STEAP3Q658P3 488 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 LHFPL4Q7Z7J7 247 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 C8orf31Q8N9H6 132 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 OR4C13Q8NGP0 309 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 OR10X1Q8NGY0 326 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 C17orf50Q8WW18 174 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 IL1F10Q8WWZ1 152 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 LEAP2Q969E1 77 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 S100A16Q96FQ6 103 aaKnown RBP8.17□□□□□ -1.1
VPS28-204ENST00000526054 CMTM3Q96MX0 182 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 MEGF9Q9H1U4 602 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 ABCG5Q9H222 651 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 Q9N2K0 584 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 OR2S2Q9NQN1 319 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 DPM3Q9P2X0 92 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 COMMD3Q9UBI1 195 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 PSG11Q9UQ72 335 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 KCNK7Q9Y2U2 307 aa8.17□□□□□ -1.1
VPS28-204ENST00000526054 TRAV18A0A075B6X5 111 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 TMEM235A6NFC5 223 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 OOSP1A8MZH6 123 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 TRDCB7Z8K6 153 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 BUB1B-PAK6H3BSN5 160 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 RGS5O15539 181 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 IGHV3-7P01780 117 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 DTYMKP23919 212 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 MNDAP41218 407 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 LSAMPQ13449 338 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 MADCAM1Q13477 382 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 HERPUD1Q15011 391 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 SSX2Q16385 188 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 LY6EQ16553 131 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 ZNF260Q3ZCT1 412 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 TMEM69Q5SWH9 247 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 HACD4Q5VWC8 232 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 CCDC144NLQ6NUI1 221 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 C11orf88Q6PI97 169 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 Q6ZPA2 131 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 LINC00311Q8N616 119 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 OR10V1Q8NGI7 309 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 RPEQ96AT9 228 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 AJUBAQ96IF1 538 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 SSX3Q99909 188 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 ABCB10Q9NRK6 738 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 HILPDAQ9Y5L2 63 aa8.16□□□□□ -1.1
VPS28-204ENST00000526054 VGLL3A8MV65 326 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 FABP7O15540 132 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 HSPA12AO43301 675 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 XRCC3O43542 346 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 YPEL1O60688 119 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 APOA1P02647 267 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 LPLP06858 475 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 GNMTQ14749 295 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 SRSF7Q16629 238 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS28-204ENST00000526054 MORN2Q502X0 79 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 PLA1AQ53H76 456 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 LY6G6FQ5SQ64 297 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 LDLRAD2Q5SZI1 272 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 UTF1Q5T230 341 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 TPTE2P1Q5T6R2 138 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 Q6ZS49 121 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 KLHDC1Q8N7A1 406 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 OR52L2PQ8NGH6 319 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 OR4A4PQ8NGN8 299 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 OR6Q1Q8NGQ2 317 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 OR2T6Q8NHC8 308 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 NUDCD2Q8WVJ2 157 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 TOMM40LQ969M1 308 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 YPEL2Q96QA6 119 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 OCSTAMPQ9BR26 566 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 ABHD14AQ9BUJ0 271 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 RANBP3Q9H6Z4 567 aaPredicted RBP8.15□□□□□ -1.1
VPS28-204ENST00000526054 AUNIPQ9H7T9 357 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 RAB18Q9NP72 206 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 ADAM30Q9UKF2 790 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 SIGLEC9Q9Y336 463 aa8.15□□□□□ -1.1
VPS28-204ENST00000526054 A0A1W2PPE3 182 aa8.14□□□□□ -1.11
VPS28-204ENST00000526054 FAM25AB3EWG3 89 aa8.14□□□□□ -1.11
VPS28-204ENST00000526054 FAM25CB3EWG5 89 aa8.14□□□□□ -1.11
VPS28-204ENST00000526054 FAM25GB3EWG6 89 aa8.14□□□□□ -1.11
VPS28-204ENST00000526054 G3V4G9 280 aa8.14□□□□□ -1.11
VPS28-204ENST00000526054 HPGDSO60760 199 aa8.14□□□□□ -1.11
VPS28-204ENST00000526054 DIRAS3O95661 229 aa8.14□□□□□ -1.11
VPS28-204ENST00000526054 OPN1MWP04001 364 aa8.14□□□□□ -1.11
VPS28-204ENST00000526054 EIF4EP06730 217 aaKnown RBP8.14□□□□□ -1.11
VPS28-204ENST00000526054 SCTP09683 121 aa8.14□□□□□ -1.11
VPS28-204ENST00000526054 OPN1MW2P0DN77 364 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms