RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 CASQ2O14958 399 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-221ENST00000523814 RGS11O94810 467 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 CHATP28329 748 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 PPIFP30405 207 aaKnown RBP13.12□□□□□ -0.31
SPIDR-221ENST00000523814 RAB25P57735 213 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 INSL4Q14641 139 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 ZNF833PQ6ZTB9 187 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 LRRTM1Q86UE6 522 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 NEDD4LQ96PU5 975 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 NABP2Q9BQ15 211 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 SULT4A1Q9BR01 284 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 FAAP24Q9BTP7 215 aa13.12□□□□□ -0.31
SPIDR-221ENST00000523814 CDK1P06493 297 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 VSIG8P0DPA2 414 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 ACTBP60709 375 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 RPS27AP62979 156 aaKnown RBP13.11□□□□□ -0.31
SPIDR-221ENST00000523814 FHL3Q13643 280 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 KIAA0141Q14154 515 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-221ENST00000523814 MMDQ15546 238 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 NKAPLQ5M9Q1 402 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 FAM27D1Q5T7N8 215 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 GLT8D1Q68CQ7 371 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 OR10K2Q6IF99 312 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 MND1Q9BWT6 205 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 MRPL20Q9BYC9 149 aaKnown RBP13.11□□□□□ -0.31
SPIDR-221ENST00000523814 SCOCQ9UIL1 159 aa13.11□□□□□ -0.31
SPIDR-221ENST00000523814 IGLV1-40P01703 118 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 HLA-DRB1P01911 266 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 SLC2A2P11168 524 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-221ENST00000523814 SRMP19623 302 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 HTR2CP28335 458 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 OR3A3P47888 321 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 LUMP51884 338 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-221ENST00000523814 QRFPP83859 136 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 HMGN3Q15651 99 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 C9orf66Q5T8R8 295 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 C6orf201Q7Z4U5 140 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 NPBQ8NG41 125 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 KCNG3Q8TAE7 436 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 UBE2E2Q96LR5 201 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 ZNF251Q9BRH9 671 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 TM2D1Q9BX74 207 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 KLK15Q9H2R5 256 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 OR51J1Q9H342 316 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 ABRACLQ9P1F3 81 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 LSM4Q9Y4Z0 139 aaKnown RBP13.1□□□□□ -0.31
SPIDR-221ENST00000523814 WSB1Q9Y6I7 421 aa13.1□□□□□ -0.31
SPIDR-221ENST00000523814 NBEAL2Q6ZNJ1 2754 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 TENM3Q9P273 2699 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 G3V318 75 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 NBR2O15453 112 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 NAPSAO96009 420 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 MYF6P23409 242 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 CNTFRP26992 372 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 RUNX1Q01196 453 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-221ENST00000523814 C5orf64Q2M2E5 130 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 LIN54Q6MZP7 749 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 ZNF880Q6PDB4 577 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 ZNF491Q8N8L2 437 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 OR2AK2Q8NG84 335 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 TMED9Q9BVK6 235 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 TMEM59Q9BXS4 323 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 ANKRD60Q9BZ19 345 aa13.09□□□□□ -0.31
SPIDR-221ENST00000523814 LSM2Q9Y333 95 aaKnown RBP13.09□□□□□ -0.31
SPIDR-221ENST00000523814 SAA2-SAA4A0A096LPE2 208 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 IGHV7-81A0A0B4J1V7 117 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 SEC14L6B5MCN3 397 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 PTGES3LE9PB15 166 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 SLC22A1O15245 554 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 NHLRC4P0CG21 123 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-221ENST00000523814 SAA2P0DJI9 122 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-221ENST00000523814 UNC119Q13432 240 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 SPHARQ15513 63 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 FAM71F2Q6NXP2 309 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 TMEM65Q6PI78 240 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 CEACAM19Q7Z692 300 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 SVOPQ8N4V2 548 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 MINDY2Q8NBR6 621 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 OR11H1Q8NG94 326 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 IFI27L2Q9H2X8 130 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.08□□□□□ -0.327e-7■■■■■ 30.2
SPIDR-221ENST00000523814 STEAP1Q9UHE8 339 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 VSIG4Q9Y279 399 aa13.08□□□□□ -0.32
SPIDR-221ENST00000523814 TRAV41A0A0B4J266 112 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 TMEM14DPA8MWL7 114 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 I3L521 148 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 ATP6V0E1O15342 81 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 NDUFA3O95167 84 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 UCHL1P09936 223 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 BLVRBP30043 206 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-221ENST00000523814 RAB9AP51151 201 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 HSD17B12Q53GQ0 312 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 RBM48Q5RL73 367 aaKnown RBP13.07□□□□□ -0.32
SPIDR-221ENST00000523814 OR1N2Q8NGR9 330 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 IL1F10Q8WWZ1 152 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 WWC2-AS2Q96NR7 200 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 NICN1Q9BSH3 213 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 GHITMQ9H3K2 345 aa13.07□□□□□ -0.32
SPIDR-221ENST00000523814 RIMS4Q9H426 269 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms