RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 PAX5Q02548 391 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 NKAPLQ5M9Q1 402 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 LCNL1Q6ZST4 164 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 MRPL41Q8IXM3 137 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 TMEM104Q8NE00 496 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 KLHL30-AS1Q8NEE0 82 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 OR51D1Q8NGF3 324 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 OR52M1Q8NGK5 317 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 RTN4IP1Q8WWV3 396 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 RCC1LQ96I51 464 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 CYYR1Q96J86 154 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 KCTD7Q96MP8 289 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 RASL11BQ9BPW5 248 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 BCL7BQ9BQE9 202 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 SPACA1Q9HBV2 294 aa8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 RSL24D1Q9UHA3 163 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-235ENST00000522730 WI2-2373I1.2A0A1W2PRP0 233 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 SHISA3A0PJX4 238 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 ZNF701M0R085 212 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 FGF16O43320 207 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 ARL6IP5O75915 188 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 MOSP00540 346 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 HBZP02008 142 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 MGMTP16455 207 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 FUT3P21217 361 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 MYL9P24844 172 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 CALRP27797 417 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 ZNF134P52741 427 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 ZNF816Q0VGE8 651 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 HSD17B12Q53GQ0 312 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 CT45A1Q5HYN5 189 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 C6orf183Q5T699 404 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 OR2W3Q7Z3T1 314 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 TGIF2LXQ8IUE1 241 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 STPG2Q8N412 459 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 LINC00482Q8N8I6 264 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 OR52L2PQ8NGH6 319 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 CT45A3Q8NHU0 189 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 DPF1Q92782 380 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 DGCR14Q96DF8 476 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 TAF9BQ9HBM6 251 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 OR2S2Q9NQN1 319 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 KCNIP1Q9NZI2 227 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 NBEAL2Q6ZNJ1 2754 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 COL7A1Q02388 2944 aa8.08□□□□□ -1.12
CTNNA1-235ENST00000522730 TRAV1-2A0A0B4J238 106 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 K7EIL1 84 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 SLC22A1O15245 554 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 IGHG2P01859 326 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 RPLP1P05386 114 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 SRMP19623 302 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 FSTP19883 344 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 GPR12P47775 334 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 SERPINB10P48595 397 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 THBS3P49746 956 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 F2RL1P55085 397 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 SPCS2Q15005 226 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 PNLIPRP3Q17RR3 467 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 OR10K2Q6IF99 312 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 TEX38Q6PEX7 206 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 ZNF695Q8IW36 515 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 LINC00311Q8N616 119 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 SETD6Q8TBK2 473 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 MRPS24Q96EL2 167 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 S1PR3Q99500 378 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 RAB9BQ9NP90 201 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 ZFP57Q9NU63 452 aa8.07□□□□□ -1.12
CTNNA1-235ENST00000522730 AP4M1O00189 453 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 DUS4LO95620 317 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 SLC2A2P11168 524 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 CD1BP29016 333 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 SDC2P34741 201 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 PPP1CCP36873 323 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 MYCNOSP40205 109 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 EBI3Q14213 229 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 GNMTQ14749 295 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 DEFB136Q30KP8 78 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 CXorf66Q5JRM2 361 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 ETV3LQ6ZN32 361 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 SLC25A48Q6ZT89 311 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 LRRTM1Q86UE6 522 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 C8orf31Q8N9H6 132 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 Q8N9W7 124 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 ST6GALNAC6Q969X2 333 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 NEDD4LQ96PU5 975 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 FAAP24Q9BTP7 215 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 ABCG5Q9H222 651 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 DCSTAMPQ9H295 470 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 PLSCR3Q9NRY6 295 aa8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 RCC2Q9P258 522 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-235ENST00000522730 CCL24O00175 119 aa8.05□□□□□ -1.12
CTNNA1-235ENST00000522730 PDCD5O14737 125 aa8.05□□□□□ -1.12
CTNNA1-235ENST00000522730 PDCD6O75340 191 aa8.05□□□□□ -1.12
CTNNA1-235ENST00000522730 CLEC2LP0C7M8 214 aa8.05□□□□□ -1.12
CTNNA1-235ENST00000522730 SOX6P35712 828 aa8.05□□□□□ -1.12
CTNNA1-235ENST00000522730 RPS19P39019 145 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-235ENST00000522730 MXD1Q05195 221 aa8.05□□□□□ -1.12
CTNNA1-235ENST00000522730 MORN2Q502X0 79 aa8.05□□□□□ -1.12
CTNNA1-235ENST00000522730 SIGIRRQ6IA17 410 aa8.05□□□□□ -1.12
CTNNA1-235ENST00000522730 TRAT1Q6PIZ9 186 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms