RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 MDKP21741 143 aaPredicted RBP7.57□□□□□ -1.2
CLK4-209ENST00000521621 ZNF134P52741 427 aa7.57□□□□□ -1.2
CLK4-209ENST00000521621 RFESDQ8TAC1 157 aa7.57□□□□□ -1.2
CLK4-209ENST00000521621 AGMATQ9BSE5 352 aa7.57□□□□□ -1.2
CLK4-209ENST00000521621 OR2S2Q9NQN1 319 aa7.57□□□□□ -1.2
CLK4-209ENST00000521621 RHBDL2Q9NX52 303 aa7.57□□□□□ -1.2
CLK4-209ENST00000521621 GNG12Q9UBI6 72 aa7.57□□□□□ -1.2
CLK4-209ENST00000521621 MOB4Q9Y3A3 225 aa7.57□□□□□ -1.2
CLK4-209ENST00000521621 RNF114Q9Y508 228 aa7.57□□□□□ -1.2
CLK4-209ENST00000521621 RBBP9O75884 186 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 CBX5P45973 191 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 PLA2G7Q13093 441 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 HERPUD1Q15011 391 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 MOGAT2Q3SYC2 334 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 UBE2NLQ5JXB2 153 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 SLC25A38Q96DW6 304 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 IFI27L2Q9H2X8 130 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 DAPK2Q9UIK4 370 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 HILPDAQ9Y5L2 63 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 SLC2A2P11168 524 aaPredicted RBP7.56□□□□□ -1.2
CLK4-209ENST00000521621 RPS19P39019 145 aaKnown RBP7.56□□□□□ -1.2
CLK4-209ENST00000521621 CTF1Q16619 201 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 TGIF2LXQ8IUE1 241 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 OR2T10Q8NGZ9 312 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 OR2T6Q8NHC8 308 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 LGALS14Q8TCE9 139 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 DUX5Q96PT3 197 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 ZNF251Q9BRH9 671 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 ATG5Q9H1Y0 275 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 CHMP1AQ9HD42 196 aaPredicted RBP7.56□□□□□ -1.2
CLK4-209ENST00000521621 SERTAD4Q9NUC0 356 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 RABL2AQ9UBK7 228 aaPredicted RBP7.56□□□□□ -1.2
CLK4-209ENST00000521621 RABL2BQ9UNT1 228 aa7.56□□□□□ -1.2
CLK4-209ENST00000521621 TIMM23O14925 209 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 RAB29O14966 203 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 XRCC3O43542 346 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 TFAP2AP05549 437 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 MRPS15P82914 257 aaKnown RBP7.55□□□□□ -1.2
CLK4-209ENST00000521621 NPBQ8NG41 125 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 SLC25A33Q9BSK2 321 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 TRAV39A0A0B4J263 110 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 LOC100506127A0A0U1RQW1 187 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 OR5H14A6NHG9 310 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 FABP7O15540 132 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 SLC22A5O76082 557 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 AMY1AP04745 511 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 AMY2AP04746 511 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 MC5RP33032 325 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 TMBIM6P55061 237 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 CDNFQ49AH0 187 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 OR2AK2Q8NG84 335 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 OR52L2PQ8NGH6 319 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 DIABLOQ9NR28 239 aa7.55□□□□□ -1.2
CLK4-209ENST00000521621 LIN7CQ9NUP9 197 aaKnown RBP7.55□□□□□ -1.2
CLK4-209ENST00000521621 IGKV1-6A0A0C4DH72 117 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 SLC31A2O15432 143 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 MOSP00540 346 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 SNRNP70P08621 437 aaKnown RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 CLEC2LP0C7M8 214 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 NAT1P18440 290 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 CNIH2Q6PI25 160 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 DRAM1Q8N682 238 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 C5orf56Q8N8D9 126 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 OR5AN1Q8NGI8 311 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 PHF21AQ96BD5 680 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 NABP2Q9BQ15 211 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 ING3Q9NXR8 418 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 MEX3AA1L020 520 aaKnown RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 APOA1P02647 267 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 GNG10P50151 68 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 CRIP2P52943 208 aaPredicted RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 LSAMPQ13449 338 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 GNMTQ14749 295 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 GPR107Q5VW38 600 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 H1FOOQ8IZA3 346 aaPredicted RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 AP3S1Q92572 193 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 S1PR3Q99500 378 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 RNF167Q9H6Y7 350 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 AUNIPQ9H7T9 357 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 PLSCR3Q9NRY6 295 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 NDUFA3O95167 84 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 GNB3P16520 340 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 PPP1CCP36873 323 aaKnown RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 TALDO1P37837 337 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 RORCP51449 518 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 LY6EQ16553 131 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 IDNKQ5T6J7 187 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 HOGA1Q86XE5 327 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 COMMD1Q8N668 190 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 C15orf40Q8WUR7 153 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 LEAP2Q969E1 77 aa7.54□□□□□ -1.2
CLK4-209ENST00000521621 S100A16Q96FQ6 103 aaKnown RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 EAF1Q96JC9 268 aaPredicted RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 HDHD3Q9BSH5 251 aaPredicted RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 C11orf54Q9H0W9 315 aaPredicted RBP7.54□□□□□ -1.2
CLK4-209ENST00000521621 SAA2-SAA4A0A096LPE2 208 aa7.53□□□□□ -1.2
CLK4-209ENST00000521621 A0A0B4J203 849 aa7.53□□□□□ -1.2
CLK4-209ENST00000521621 SULT1C2O00338 296 aa7.53□□□□□ -1.2
CLK4-209ENST00000521621 SSX5O60225 188 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms