RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 CDCA4Q9BXL8 241 aa1.9□□□□□ -2.11
NPM1-206ENST00000519955 UBQLN4Q9NRR5 601 aa1.9□□□□□ -2.11
NPM1-206ENST00000519955 MRPS16Q9Y3D3 137 aaKnown RBP1.9□□□□□ -2.11
NPM1-206ENST00000519955 ATAD5Q96QE3 1844 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 COL4A2P08572 1712 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 OTOFQ9HC10 1997 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 PLXNA3P51805 1871 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 CACNA1SQ13698 1873 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 IGHV3-73A0A0B4J1V6 119 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 MPZL2O60487 215 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 LY6HO94772 140 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 SOD1P00441 154 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 SLC25A16P16260 332 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 ORM2P19652 201 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 DLX6P56179 175 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 RNASEH2CQ8TDP1 164 aaKnown RBP1.89□□□□□ -2.11
NPM1-206ENST00000519955 C16orf78Q8WTQ4 265 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 OR52A5Q9H2C5 316 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 ASCL3Q9NQ33 180 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 PSMD13Q9UNM6 376 aa1.89□□□□□ -2.11
NPM1-206ENST00000519955 NUP153P49790 1475 aaKnown RBP1.88□□□□□ -2.11
NPM1-206ENST00000519955 STRCP1A6NGW2 1772 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 VPS37CA5D8V6 355 aaPredicted RBP1.88□□□□□ -2.11
NPM1-206ENST00000519955 LINC00862A6NCI5 91 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 C19orf71A6NCJ1 209 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 CD36P16671 472 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 CDK2P24941 298 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 ATP6V0CP27449 155 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 CD200P41217 278 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 PSMD7P51665 324 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 STC1P52823 247 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 RASL11AQ6T310 242 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 TMEM75Q8N9X5 138 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 C16orf95Q9H693 158 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 DNAJC12Q9UKB3 198 aa1.88□□□□□ -2.11
NPM1-206ENST00000519955 C9J4A7 227 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 STK16O75716 305 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 BRI3O95415 125 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 AGTR1P30556 359 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 OR1E2P47887 323 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 ACTBP60709 375 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 FGF12P61328 243 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 ACTG1P63261 375 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 PRDX4Q13162 271 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 C1DQ13901 141 aaKnown RBP1.87□□□□□ -2.11
NPM1-206ENST00000519955 HES1Q14469 280 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 Q6ZS52 159 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 OR5AK3PQ8NH89 298 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 TNFAIP8L1Q8WVP5 186 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 SMIM12Q96EX1 92 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 ABHD14BQ96IU4 210 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 MED10Q9BTT4 135 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 C11orf1Q9H5F2 150 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 TREM1Q9NP99 234 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 GLS2Q9UI32 602 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.87□□□□□ -2.11
NPM1-206ENST00000519955 SNX10Q9Y5X0 201 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 SORL1Q92673 2214 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 ADAMTSL1Q8N6G6 1762 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 CLUHO75153 1309 aa1.87□□□□□ -2.11
NPM1-206ENST00000519955 MUC6Q6W4X9 2439 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 ESDP10768 282 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 PVALBP20472 110 aaPredicted RBP1.86□□□□□ -2.11
NPM1-206ENST00000519955 KDELR2P33947 212 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 OPRM1P35372 400 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 TSPEAR-AS2P59090 65 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 ATP6V1C2Q8NEY4 427 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 ACBD6Q9BR61 282 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 Q9BRP9 147 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 MED28Q9H204 178 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 OTOGLQ3ZCN5 2332 aa1.86□□□□□ -2.11
NPM1-206ENST00000519955 ZNF638Q14966 1978 aaKnown RBP1.85□□□□□ -2.11
NPM1-206ENST00000519955 GRIFINA4D1Z8 144 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 H3BPC8 53 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 UBFD1O14562 309 aaKnown RBP1.85□□□□□ -2.11
NPM1-206ENST00000519955 PRB1P04280 392 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 GZMBP10144 247 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 ANGPT1Q15389 498 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 LGALS9CQ6DKI2 356 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 XKRXQ6PP77 449 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 SCGB1D4Q6XE38 83 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 OR4X1Q8NH49 305 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 FNDC9Q8TBE3 224 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 TRNT1Q96Q11 434 aaKnown RBP1.85□□□□□ -2.11
NPM1-206ENST00000519955 ZNF426Q9BUY5 554 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 HHLA2Q9UM44 414 aa1.85□□□□□ -2.11
NPM1-206ENST00000519955 FAM25EA8MYX2 175 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 MKRN2OSH3BPM6 223 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 ASS1P00966 412 aaKnown RBP1.84□□□□□ -2.11
NPM1-206ENST00000519955 IGLV3-27P01718 113 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 CD7P09564 240 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 CLEC12BQ2HXU8 276 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 SYCE1Q8N0S2 351 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 DCANP1Q8TF63 244 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 LRRC45Q96CN5 670 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 ACY3Q96HD9 319 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 OR52B2Q96RD2 323 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 TBX5Q99593 518 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 C1orf109Q9NX04 203 aa1.84□□□□□ -2.11
NPM1-206ENST00000519955 NDUFB11Q9NX14 153 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms