RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 COL10A1Q03692 680 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 NCMAPQ5T1S8 102 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 LRP11Q86VZ4 500 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 RDH5Q92781 318 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 TOMM40LQ969M1 308 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 TAF9BQ9HBM6 251 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 A0A1B0GW55 424 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 M0R1B8 84 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 SIRPB1O00241 398 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 PHF1O43189 567 aaPredicted RBP6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 RBFOX2O43251 390 aaKnown RBP eCLIP6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 DUX4L2P0CJ85 424 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 DUX4L3P0CJ86 424 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 DUX4L4P0CJ87 422 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 DUX4L5P0CJ88 424 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 DUX4L6P0CJ89 424 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 DUX4L7P0CJ90 424 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 S100GP29377 79 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 RPL12P30050 165 aaKnown RBP6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 PRDX2P32119 198 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 SULT1A2P50226 295 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 KLRB1Q12918 225 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 MST1LQ2TV78 715 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 PRAMEF6Q5VXH4 476 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 GFRALQ6UXV0 394 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 CBLN2Q8IUK8 224 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 ZNF565Q8N9K5 539 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 OR51B6Q9H340 312 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 GCM1Q9NP62 436 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 RAB9BQ9NP90 201 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 DUX4Q9UBX2 424 aa6.69□□□□□ -1.34
ARFGEF1-204ENST00000518290 HCFC1P51610 2035 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 C13orf42A0A1B0GVH6 325 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 DPRXA6NFQ7 191 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 SHISA9B4DS77 424 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 WNT9BO14905 357 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 ST8SIA3O43173 380 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 IFNA4P05014 189 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 OR8U8P0C7N1 319 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 SEC11BP0C7V7 166 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 GZMHP20718 246 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 ADIPOQQ15848 244 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 PHLDA2Q53GA4 152 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 ZNF788Q6ZQV5 615 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 ZNF439Q8NDP4 499 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 BPIFCQ8NFQ6 507 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 LRRC29Q8WV35 223 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 GALMQ96C23 342 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 C14orf79Q96F83 325 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 A0A1B0GW64 132 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 LY86O95711 162 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 GRPP07492 148 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 HOXB5P09067 269 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 SMIM6P0DI80 62 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 BRWD1-AS2P59051 145 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 FXYD4P59646 89 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 FAM27E3Q08E93 113 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 MIDNQ504T8 468 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 IL34Q6ZMJ4 242 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 DRAM1Q8N682 238 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 GAFA1Q96PS6 74 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 OR2V2Q96R30 315 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 OR51M1Q9H341 326 aa6.68□□□□□ -1.34
ARFGEF1-204ENST00000518290 SCAF4O95104 1147 aaKnown RBP6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 HBZP02008 142 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 PAX9P55771 341 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 ZNF826PQ6ZT77 177 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 TCF23Q7RTU1 214 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 CISD2Q8N5K1 135 aaKnown RBP6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 DDB2Q92466 427 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 MSL2Q9HCI7 577 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 PARP11Q9NR21 331 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 KCNIP1Q9NZI2 227 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 RNF7Q9UBF6 113 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 KAAG1Q9UBP8 84 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 TRAPPC2LQ9UL33 140 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 NKX2-6A6NCS4 301 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 IGKV1-5P01602 117 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 CRYBA1P05813 215 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 SPINK2P20155 84 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 SNRPEP62304 92 aaKnown RBP6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 SMCO1Q147U7 214 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 SPRNQ5BIV9 151 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 OR2Z1Q8NG97 314 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 RNF141Q8WVD5 230 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 ASF1BQ9NVP2 202 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 LPAR3Q9UBY5 353 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 METRNQ9UJH8 293 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 ERRFI1Q9UJM3 462 aaPredicted RBP6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 WSB1Q9Y6I7 421 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 SHANK1Q9Y566 2161 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 PPIHO43447 177 aaKnown RBP6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 IL6RP08887 468 aaPredicted RBP6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 SFTPCP11686 197 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 RAB5CP51148 216 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 FABP6P51161 128 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 ATXN7L3Q14CW9 347 aaPredicted RBP6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 SP6Q3SY56 376 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 KRBOX4Q5JUW0 171 aa6.67□□□□□ -1.34
ARFGEF1-204ENST00000518290 FAM71F2Q6NXP2 309 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms