RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 OR6M1Q8NGM8 313 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 PHF21AQ96BD5 680 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 CYYR1Q96J86 154 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 S1PR3Q99500 378 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 RASL11BQ9BPW5 248 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 SULT4A1Q9BR01 284 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 FAAP24Q9BTP7 215 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 TM2D1Q9BX74 207 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 ABCG5Q9H222 651 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 ZFP57Q9NU63 452 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 LINC01548A6NM66 108 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 AP4M1O00189 453 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 DENRO43583 198 aaKnown RBP8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 YPEL1O60688 119 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 ARL6IP5O75915 188 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 CPEP16870 476 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 CRHBPP24387 322 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 BLVRBP30043 206 aaPredicted RBP8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 PPP1CCP36873 323 aaKnown RBP8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 RANBP1P43487 201 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 RPL23AP62750 156 aaKnown RBP8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 MLLT11Q13015 90 aaPredicted RBP8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 UNC119Q13432 240 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 TMEM91Q6ZNR0 172 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 PRSS48Q7RTY5 328 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 OR2W3Q7Z3T1 314 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 C6orf201Q7Z4U5 140 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 C5orf24Q7Z6I8 188 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 STPG2Q8N412 459 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 OR51D1Q8NGF3 324 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 GALMQ96C23 342 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 RCC1LQ96I51 464 aaKnown RBP8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 CNBD2Q96M20 576 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 ABHD14AQ9BUJ0 271 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 GON7Q9BXV9 100 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 CCDC90BQ9GZT6 254 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 RIMS4Q9H426 269 aaPredicted RBP8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 PLEKHJ1Q9NW61 149 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 ABRACLQ9P1F3 81 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 LINC00527Q9UJ94 153 aa8.33□□□□□ -1.08
PDGFRB-203ENST00000517660 STARD9Q9P2P6 4700 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 SLC17A2O00624 439 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 DUS4LO95620 317 aaKnown RBP8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 NAPSAO96009 420 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 SLC6A1P30531 599 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 MYCNOSP40205 109 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 F2RL1P55085 397 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 RPS25P62851 125 aaKnown RBP8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 LSAMPQ13449 338 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 GNMTQ14749 295 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 P2RY14Q15391 338 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 HMGN3Q15651 99 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 PNLIPRP3Q17RR3 467 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 FOXB2Q5VYV0 432 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 TEX38Q6PEX7 206 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 GFI1Q99684 422 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 MGLLQ99685 303 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 NICN1Q9BSH3 213 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 URM1Q9BTM9 101 aaKnown RBP8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 LPAR5Q9H1C0 372 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 PLGRKTQ9HBL7 147 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 CHMP1AQ9HD42 196 aaPredicted RBP8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 ACOT13Q9NPJ3 140 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 STEAP1Q9UHE8 339 aa8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 AK6Q9Y3D8 172 aaKnown RBP8.32□□□□□ -1.08
PDGFRB-203ENST00000517660 TRBV6-6A0A0A6YYG2 114 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 SOCS1O15524 211 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 ARSBP15848 533 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 SOX6P35712 828 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 MAP2K4P45985 399 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 THBS3P49746 956 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 PSMD7P51665 324 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 RAB11BQ15907 218 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 ZNF880Q6PDB4 577 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 MOB1BQ7L9L4 216 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 MRPL41Q8IXM3 137 aaKnown RBP8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 ODF3L1Q8IXM7 274 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 FAM89BQ8N5H3 189 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 FAM71E2Q8N5Q1 922 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 LINC00482Q8N8I6 264 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 OR2AK2Q8NG84 335 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 NABP2Q9BQ15 211 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 GPR61Q9BZJ8 451 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 KCNK15Q9H427 330 aa8.31□□□□□ -1.08
PDGFRB-203ENST00000517660 A0A0A6YYD4 124 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 NUDT19A8MXV4 375 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 TNFAIP8O95379 198 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 ELANEP08246 267 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 CALRP27797 417 aaKnown RBP8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 OR3A3P47888 321 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 FABP5Q01469 135 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 FOXE3Q13461 319 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 C2orf76Q3KRA6 126 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 CXorf66Q5JRM2 361 aaPredicted RBP8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 ETV3LQ6ZN32 361 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 ZNF833PQ6ZTB9 187 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 C8orf86Q6ZUL3 223 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 ZNF695Q8IW36 515 aa8.3□□□□□ -1.08
PDGFRB-203ENST00000517660 SVOPQ8N4V2 548 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms