RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 AESQ08117 197 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 C1QL2Q7Z5L3 287 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR5A2Q8NGI9 324 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 MRGPRFQ96AM1 343 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 C10orf35Q96D05 121 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 GDF9O60383 454 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 CYC1P08574 325 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 FAM157CP0CG43 387 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 KLK2P20151 261 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 MDH2P40926 338 aaKnown RBP9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 PMELP40967 661 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 HLA-DRB3P79483 266 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 MRPS11P82912 194 aaKnown RBP9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 MISP3Q96FF7 219 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 ANGPTL4Q9BY76 406 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR1A1Q9P1Q5 309 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 A0A0A6YYD4 124 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 C20orf202A1L168 122 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 TGOLN2O43493 480 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 RBP4P02753 201 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 FGF5P12034 268 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 ATP1A1-AS1Q5TC04 95 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 ASPHD2Q6ICH7 369 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 LINC00469Q8N7U9 141 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 GLRX2Q9NS18 164 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 MPDZO75970 2070 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 MED13LQ71F56 2210 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 PTPRSQ13332 1948 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 CYTIPO60759 359 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 ERVFC1-1P60608 527 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR52M1Q8NGK5 317 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 FAM103A1Q9BTL3 118 aaKnown RBP9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 DOK5Q9P104 306 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 LTBP2Q14767 1821 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 CLDN34H7C241 214 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 F2RP25116 425 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 ZNF154Q13106 437 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 IGFBP7Q16270 282 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 RSPO4Q2I0M5 234 aaPredicted RBP9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 CDCP2Q5VXM1 449 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 TMEM56Q96MV1 263 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 CLCF1Q9UBD9 225 aa9.36□□□□□ -0.91
PCDHGA1-202ENST00000517417 CHEK1O14757 476 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 FCGR3AP08637 254 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 CFPP27918 469 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR5D13Q8NGL4 314 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 TXN2Q99757 166 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 IGHV3OR15-7A0A075B7D8 119 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 CCL8P80075 99 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 SLC25A47Q6Q0C1 308 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 CYB561D1Q8N8Q1 229 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 ZDHHC11Q9H8X9 412 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 SAP30LQ9HAJ7 183 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 SERTM2A0A1B0GWG4 89 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 NPIPB7O75200 414 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 CD5P06127 495 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 PRF1P14222 555 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 A0A1W2PPE3 182 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 DBX1A6NMT0 343 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 H0YL77 283 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 UBE2CO00762 179 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 SUPT4H1P63272 117 aaKnown RBP9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 RUNX1Q01196 453 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 UBE2V2Q15819 145 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 TMEM211Q6ICI0 200 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR1K1Q8NGR3 316 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 LRRK1Q38SD2 2015 aa9.35□□□□□ -0.91
PCDHGA1-202ENST00000517417 C5orf52A6NGY3 159 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 CLPSP04118 112 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 FTH1P19P0C7X4 201 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 CSRP1P21291 193 aaKnown RBP9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 MPV17LQ2QL34 196 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 TIPARPQ7Z3E1 657 aaKnown RBP9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 RNF144BQ7Z419 303 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR10G4Q8NGN3 311 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR10G9Q8NGN4 311 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR10G7Q8NGN6 311 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 RND1Q92730 232 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 GPHA2Q96T91 129 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 GAL3ST2Q9H3Q3 398 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 ELOA3CA0A087WX78 387 aaPredicted RBP9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 RAMP1O60894 148 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 RAB7AP51149 207 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 MST1LQ2TV78 715 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 APCDD1LQ8NCL9 501 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR2T6Q8NHC8 308 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 R3HDM4Q96D70 268 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 MEGF10Q96KG7 1140 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 SNX22Q96L94 193 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 SLC35D1Q9NTN3 355 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR2W1Q9Y3N9 320 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 A0A1W2PNV4 684 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 CD3EP07766 207 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 FOLR2P14207 255 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 GZMHP20718 246 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms