RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 BATFQ16520 125 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 KRTAP24-1Q3LI83 254 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 TMEM176BQ3YBM2 270 aaPredicted RBP4.63□□□□□ -1.67
NUP54-218ENST00000515460 ACSM3Q53FZ2 586 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 RAET1LQ5VY80 246 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 TMEM42Q69YG0 159 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 WDR82Q6UXN9 313 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 SLC36A1Q7Z2H8 476 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 TMEM179BQ7Z7N9 219 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 MOGAT3Q86VF5 341 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 DND1Q8IYX4 353 aaKnown RBP4.63□□□□□ -1.67
NUP54-218ENST00000515460 FAM71E2Q8N5Q1 922 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 COX18Q8N8Q8 333 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 INO80EQ8NBZ0 244 aaPredicted RBP4.63□□□□□ -1.67
NUP54-218ENST00000515460 LFNGQ8NES3 379 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 OR2Z1Q8NG97 314 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 SFXN5Q8TD22 340 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 SMIM4Q8WVI0 70 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 TNFAIP8L1Q8WVP5 186 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 SPRYD4Q8WW59 207 aaPredicted RBP4.63□□□□□ -1.67
NUP54-218ENST00000515460 ITLN2Q8WWU7 325 aaPredicted RBP4.63□□□□□ -1.67
NUP54-218ENST00000515460 PTH2Q96A98 100 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 MICU1Q9BPX6 476 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 RSG1Q9BU20 258 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 P2RY12Q9H244 342 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 RAB18Q9NP72 206 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 NOX4Q9NPH5 578 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 SLC52A3Q9NQ40 469 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 AIG1Q9NVV5 245 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 TMEM242Q9NWH2 141 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 P2RX2Q9UBL9 471 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 SHPKQ9UHJ6 478 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 MRM2Q9UI43 246 aaKnown RBP4.63□□□□□ -1.67
NUP54-218ENST00000515460 HHLA2Q9UM44 414 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 RASD1Q9Y272 281 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 LAMTOR2Q9Y2Q5 125 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 RPL36Q9Y3U8 105 aaKnown RBP4.63□□□□□ -1.67
NUP54-218ENST00000515460 ENPP4Q9Y6X5 453 aa4.63□□□□□ -1.67
NUP54-218ENST00000515460 CHD3Q12873 2000 aaKnown RBP4.62□□□□□ -1.67
NUP54-218ENST00000515460 TRBV24-1A0A075B6N3 115 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 hCG_38984A0A1B0GV85 526 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 A0A1W2PRS3 328 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 TMEM129A0AVI4 362 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 GAGE12JA6NER3 117 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 GABARAPH6UMI1 98 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 J3QR89 54 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 AZIN1O14977 448 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 ARPC1BO15143 372 aaKnown RBP4.62□□□□□ -1.67
NUP54-218ENST00000515460 PHF1O43189 567 aaPredicted RBP4.62□□□□□ -1.67
NUP54-218ENST00000515460 SNAI2O43623 268 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 LANCL1O43813 399 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 OPN1SWP03999 348 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 UROSP10746 265 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 AREGP15514 252 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 NPPBP16860 134 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 IGFBP2P18065 325 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 ELK1P19419 428 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 GDF1P27539 372 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 ID1P41134 155 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 GPR6P46095 362 aaPredicted RBP4.62□□□□□ -1.67
NUP54-218ENST00000515460 UCP2P55851 309 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 RAB38P57729 211 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 TAS2R43P59537 309 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 TAS2R50P59544 299 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 PLP1P60201 277 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 SNRPGP62308 76 aaKnown RBP4.62□□□□□ -1.67
NUP54-218ENST00000515460 RPL32P62910 135 aaKnown RBP4.62□□□□□ -1.67
NUP54-218ENST00000515460 SELENOWP63302 87 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 GAGE5Q13069 117 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 GAGE6Q13070 117 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 ELOBQ15370 118 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 PCK2Q16822 640 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 LTC4SQ16873 150 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 ACOT6Q3I5F7 207 aaPredicted RBP4.62□□□□□ -1.67
NUP54-218ENST00000515460 CCSMST1Q4G0I0 132 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 LRRC10Q5BKY1 277 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 PDZD11Q5EBL8 140 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 GFI1BQ5VTD9 330 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 DCAF12L2Q5VW00 463 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 BTNL8Q6UX41 500 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 ZNF534Q76KX8 674 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 TMPRSS11BQ86T26 416 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 FBXL14Q8N1E6 418 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 METTL27Q8N6F8 245 aaPredicted RBP4.62□□□□□ -1.67
NUP54-218ENST00000515460 KLHDC1Q8N7A1 406 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 BCORP1Q8N888 145 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 ZSCAN4Q8NAM6 433 aaPredicted RBP4.62□□□□□ -1.67
NUP54-218ENST00000515460 NOXO1Q8NFA2 376 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 SLC26A10Q8NG04 563 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 OR52E5Q8NH55 327 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 LYPD6BQ8NI32 183 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 MOAP1Q96BY2 351 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 C8orf44Q96CB5 159 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 MS4A6EQ96DS6 147 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 PIK3IP1Q96FE7 263 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 SLC35G5Q96KT7 338 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 SIGLEC12Q96PQ1 595 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 VAMP8Q9BV40 100 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 LINC00470Q9BZP3 86 aa4.62□□□□□ -1.67
NUP54-218ENST00000515460 BEX1Q9HBH7 125 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms