RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PLAC9Q5JTB6 97 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 FAM53AQ6NSI3 398 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-210ENST00000515420 FAM71F2Q6NXP2 309 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 Q6ZPA2 131 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 Q6ZS46 218 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 MOB3BQ86TA1 216 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 Q8N6K4 173 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 OR8H1Q8NGG4 311 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 OR52L2PQ8NGH6 319 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 OR2T10Q8NGZ9 312 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 RAB3CQ96E17 227 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 KCTD7Q96MP8 289 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 CMSS1Q9BQ75 279 aaKnown RBP10.18□□□□□ -0.78
CLCN3-210ENST00000515420 GHITMQ9H3K2 345 aa10.18□□□□□ -0.78
CLCN3-210ENST00000515420 VWFP04275 2813 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 A0A087WXM4 84 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 SERPINE3A8MV23 424 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 RAB27BO00194 218 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 TMEM127O75204 238 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 SCGNO76038 276 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 DIRAS3O95661 229 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 REG1BP48304 166 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 SCAND1P57086 179 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 MRPS15P82914 257 aaKnown RBP10.17□□□□□ -0.78
CLCN3-210ENST00000515420 GNMTQ14749 295 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 NEDD8Q15843 81 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 TIMM50Q3ZCQ8 353 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 C5orf56Q8N8D9 126 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 OR2AK2Q8NG84 335 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 OR10R2Q8NGX6 335 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 IL1F10Q8WWZ1 152 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 Q9N2K0 584 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 VCX3AQ9NNX9 186 aa10.17□□□□□ -0.78
CLCN3-210ENST00000515420 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLCN3-210ENST00000515420 MOSP00540 346 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 CSF1P09603 554 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 CD3GP09693 182 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 HIST1H1DP16402 221 aaKnown RBP10.16□□□□□ -0.78
CLCN3-210ENST00000515420 CD36P16671 472 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 ZBTB25P24278 435 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 PLA2G7Q13093 441 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 LSAMPQ13449 338 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 SFXN4Q6P4A7 337 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 ZNF833PQ6ZTB9 187 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 NDUFA11Q86Y39 141 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 ODF3L1Q8IXM7 274 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 LYG1Q8N1E2 194 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 SETD6Q8TBK2 473 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 EDARADDQ8WWZ3 215 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 EAF1Q96JC9 268 aaPredicted RBP10.16□□□□□ -0.78
CLCN3-210ENST00000515420 HDHD3Q9BSH5 251 aaPredicted RBP10.16□□□□□ -0.78
CLCN3-210ENST00000515420 CENPOQ9BU64 300 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 OR51E2Q9H255 320 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 PIPOXQ9P0Z9 390 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 KCNK7Q9Y2U2 307 aa10.16□□□□□ -0.78
CLCN3-210ENST00000515420 MFNGO00587 321 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 SERPINB10P48595 397 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 KIR2DS1Q14954 304 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 SRSF7Q16629 238 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLCN3-210ENST00000515420 TMEM95Q3KNT9 176 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 MOGAT2Q3SYC2 334 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 TSPAN14Q8NG11 270 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 OR4A4PQ8NGN8 299 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 CHCHD6Q9BRQ6 235 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 TOLLIPQ9H0E2 274 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 IFI27L2Q9H2X8 130 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 LIN7CQ9NUP9 197 aaKnown RBP10.15□□□□□ -0.78
CLCN3-210ENST00000515420 SLC23A1Q9UHI7 598 aa10.15□□□□□ -0.78
CLCN3-210ENST00000515420 SAA2-SAA4A0A096LPE2 208 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 IGHV3-72A0A0B4J1Y9 119 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 A0A0B4J203 849 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 TRIM64CA6NLI5 447 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 TRDCB7Z8K6 153 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 RAB29O14966 203 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 HSPA12AO43301 675 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 TSPAN15O95858 294 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 IGHG2P01859 326 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 FCGR3AP08637 254 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 SAA2P0DJI9 122 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-210ENST00000515420 SLC2A2P11168 524 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-210ENST00000515420 SDC2P34741 201 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 CD83Q01151 205 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 HNF4GQ14541 408 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 Q6ZS49 121 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 C5orf24Q7Z6I8 188 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 OR5AU1Q8NGC0 362 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 CHPT1Q8WUD6 406 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 S1PR3Q99500 378 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 AGMATQ9BSE5 352 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 CABLES2Q9BTV7 478 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 DAPK2Q9UIK4 370 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 ETV7Q9Y603 341 aa10.14□□□□□ -0.79
CLCN3-210ENST00000515420 LOC100506127A0A0U1RQW1 187 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 OPN1MWP04001 364 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 SCTP09683 121 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 OPN1MW2P0DN77 364 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 OPN1MW3P0DN78 364 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 CD28P10747 220 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 GNB3P16520 340 aa10.13□□□□□ -0.79
CLCN3-210ENST00000515420 DTYMKP23919 212 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms