RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 J3QR06 171 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 IGLV1-47P01700 117 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 IGHV1-69P01742 117 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 PMP2P02689 132 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 IL7P13232 177 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 HNF1AP20823 631 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 PRRX1P54821 245 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 BPIFB3P59826 476 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 MIDNQ504T8 468 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 RNASE10Q5GAN6 216 aaKnown RBP17.09■□□□□ 0.33
LSM6-207ENST00000515311 FAM53AQ6NSI3 398 aaPredicted RBP17.09■□□□□ 0.33
LSM6-207ENST00000515311 STEAP1BQ6NZ63 245 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 SLC25A48Q6ZT89 311 aaKnown RBP17.09■□□□□ 0.33
LSM6-207ENST00000515311 LINC00311Q8N616 119 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 OR2AK2Q8NG84 335 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 TSC22D3Q99576 134 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 RDH8Q9NYR8 311 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 ZNF69Q9UC07 566 aa17.09■□□□□ 0.33
LSM6-207ENST00000515311 TOR1AO14656 332 aa17.08■□□□□ 0.32
LSM6-207ENST00000515311 AKAIN1P0CW23 69 aa17.08■□□□□ 0.32
LSM6-207ENST00000515311 IGHV4-38-2P0DP08 117 aa17.08■□□□□ 0.32
LSM6-207ENST00000515311 RFX2P48378 723 aa17.08■□□□□ 0.32
LSM6-207ENST00000515311 KLF9Q13886 244 aaPredicted RBP17.08■□□□□ 0.32
LSM6-207ENST00000515311 MEF2DQ14814 521 aa17.08■□□□□ 0.32
LSM6-207ENST00000515311 TOMM5Q8N4H5 51 aa17.08■□□□□ 0.32
LSM6-207ENST00000515311 MMP28Q9H239 520 aa17.08■□□□□ 0.32
LSM6-207ENST00000515311 HIVEP2P31629 2446 aa17.08■□□□□ 0.32
LSM6-207ENST00000515311 M0QYG6 137 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 TUSC2O75896 110 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 RAB3DO95716 219 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 IGHV3-7P01780 117 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 ARG1P05089 322 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 GNG10P50151 68 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 CT45A1Q5HYN5 189 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 DHRS11Q6UWP2 260 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 PDZD9Q8IXQ8 264 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 ARRDC1Q8N5I2 433 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 CT45A3Q8NHU0 189 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 GIMAP1Q8WWP7 306 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 ABHD14AQ9BUJ0 271 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 PARP12Q9H0J9 701 aaKnown RBP17.07■□□□□ 0.32
LSM6-207ENST00000515311 GSX1Q9H4S2 264 aaPredicted RBP17.07■□□□□ 0.32
LSM6-207ENST00000515311 NUP50Q9UKX7 468 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 OR2W1Q9Y3N9 320 aa17.07■□□□□ 0.32
LSM6-207ENST00000515311 AMMECR1Q9Y4X0 333 aaPredicted RBP17.07■□□□□ 0.32
LSM6-207ENST00000515311 NSD1Q96L73 2696 aaPredicted RBP17.07■□□□□ 0.32
LSM6-207ENST00000515311 SONP18583 2426 aaKnown RBP17.07■□□□□ 0.32
LSM6-207ENST00000515311 NPFFO15130 113 aa17.06■□□□□ 0.32
LSM6-207ENST00000515311 NFYAP23511 347 aaPredicted RBP17.06■□□□□ 0.32
LSM6-207ENST00000515311 FCGR2CP31995 323 aa17.06■□□□□ 0.32
LSM6-207ENST00000515311 INPP1P49441 399 aa17.06■□□□□ 0.32
LSM6-207ENST00000515311 RAB7AP51149 207 aa17.06■□□□□ 0.32
LSM6-207ENST00000515311 ZNF134P52741 427 aa17.06■□□□□ 0.32
LSM6-207ENST00000515311 HLA-DRB5Q30154 266 aa17.06■□□□□ 0.32
LSM6-207ENST00000515311 ZNF660Q6AZW8 331 aaPredicted RBP17.06■□□□□ 0.32
LSM6-207ENST00000515311 OR4P4Q8NGL7 312 aa17.06■□□□□ 0.32
LSM6-207ENST00000515311 CREB3L1Q96BA8 519 aa17.06■□□□□ 0.32
LSM6-207ENST00000515311 TINAGL1Q9GZM7 467 aaPredicted RBP17.06■□□□□ 0.32
LSM6-207ENST00000515311 C11orf54Q9H0W9 315 aaPredicted RBP17.06■□□□□ 0.32
LSM6-207ENST00000515311 GHITMQ9H3K2 345 aa17.06■□□□□ 0.32
LSM6-207ENST00000515311 TBL2Q9Y4P3 447 aaKnown RBP17.06■□□□□ 0.32
LSM6-207ENST00000515311 J3QRK9 145 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 SLC31A2O15432 143 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 IFNA6P05013 189 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 SAA4P35542 130 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 FAUP35544 74 aaKnown RBP17.05■□□□□ 0.32
LSM6-207ENST00000515311 MINOS1Q5TGZ0 78 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 ZNF57Q68EA5 555 aaPredicted RBP17.05■□□□□ 0.32
LSM6-207ENST00000515311 TMEM17Q86X19 198 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 OR4D10Q8NGI6 311 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 OR4C16Q8NGL9 310 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 OR10X1Q8NGY0 326 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 OR6F1Q8NGZ6 308 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 AGMATQ9BSE5 352 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 IFI27L2Q9H2X8 130 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 CDC42EP3Q9UKI2 254 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 MINOS1-NBL1R4GNA1 71 aa17.05■□□□□ 0.32
LSM6-207ENST00000515311 IGHV3OR16-10A0A075B7F0 116 aa17.04■□□□□ 0.32
LSM6-207ENST00000515311 A0A1W2PPE3 182 aa17.04■□□□□ 0.32
LSM6-207ENST00000515311 BUB1B-PAK6H3BSN5 160 aa17.04■□□□□ 0.32
LSM6-207ENST00000515311 HTR1DP28221 377 aa17.04■□□□□ 0.32
LSM6-207ENST00000515311 LGALS4P56470 323 aa17.04■□□□□ 0.32
LSM6-207ENST00000515311 TSPAN5P62079 268 aa17.04■□□□□ 0.32
LSM6-207ENST00000515311 C9orf139Q6ZV77 190 aa17.04■□□□□ 0.32
LSM6-207ENST00000515311 NAV3Q8IVL0 2385 aa17.04■□□□□ 0.32
LSM6-207ENST00000515311 MXRA5Q9NR99 2828 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 UPK1BO75841 260 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 PPYP01298 95 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 AMY2AP04746 511 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 AADACP22760 399 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 SRP14P37108 136 aaKnown RBP17.03■□□□□ 0.32
LSM6-207ENST00000515311 CEACAM3P40198 252 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 ZNF137PP52743 207 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 RUSC1-AS1Q66K80 236 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 BRD3OSQ6XYD6 125 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 SLC6A7Q99884 636 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 ZNF2Q9BSG1 426 aaPredicted RBP17.03■□□□□ 0.32
LSM6-207ENST00000515311 ZNRD1Q9P1U0 126 aa17.03■□□□□ 0.32
LSM6-207ENST00000515311 A0A1W2PRD5 423 aa17.02■□□□□ 0.32
LSM6-207ENST00000515311 A0A1W2PRF3 423 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms