RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 CMC4P56277 68 aaPredicted RBP3.13□□□□□ -1.91
RFC1-216ENST00000514572 PPP1CAP62136 330 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 SKP1P63208 163 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 ADIGQ0VDE8 80 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 FLOT2Q14254 428 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 ZNF404Q494X3 552 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 Q499Y3 187 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 TRMT10CQ7L0Y3 403 aaKnown RBP3.13□□□□□ -1.91
RFC1-216ENST00000514572 SH2D6Q7Z4S9 175 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 ZNF101Q8IZC7 436 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 RNASEH2CQ8TDP1 164 aaKnown RBP3.13□□□□□ -1.91
RFC1-216ENST00000514572 DDI1Q8WTU0 396 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 CCL17Q92583 94 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 RBMXL1Q96E39 390 aaKnown RBP3.13□□□□□ -1.91
RFC1-216ENST00000514572 ZNF514Q96K75 400 aaPredicted RBP3.13□□□□□ -1.91
RFC1-216ENST00000514572 FOPNLQ96NB1 174 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 ZNF251Q9BRH9 671 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 NDEL1Q9GZM8 345 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 SND1-IT1Q9HBX3 110 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 ABCB9Q9NP78 766 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 IL37Q9NZH6 218 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 DNAJC27Q9NZQ0 273 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 KLF13Q9Y2Y9 288 aaPredicted RBP3.13□□□□□ -1.91
RFC1-216ENST00000514572 ENPP4Q9Y6X5 453 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 APCP25054 2843 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 SDK2Q58EX2 2172 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 IGKV1-6A0A0C4DH72 117 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 CENPVL3A0A0U1RRI6 287 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 ISPDA4D126 451 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 GOLGA8IPA6NC78 632 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 RBFOX3A6NFN3 312 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 ITGB1BP1O14713 200 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 HCRTO43612 131 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 VAMP5O95183 116 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 IGKV1-39P01597 117 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 IGKV1D-39P04432 117 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 UBE2G2P60604 165 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 SNRPFP62306 86 aaKnown RBP3.12□□□□□ -1.91
RFC1-216ENST00000514572 CDC20Q12834 499 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 RAB31Q13636 194 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 TRIP13Q15645 432 aaPredicted RBP3.12□□□□□ -1.91
RFC1-216ENST00000514572 NANOGP8Q6NSW7 305 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 MORN3Q6PF18 240 aaPredicted RBP3.12□□□□□ -1.91
RFC1-216ENST00000514572 UGT2A3Q6UWM9 527 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 SSX7Q7RTT5 188 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 ZNF695Q8IW36 515 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 BOD1L2Q8IYS8 172 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 SPANXA2-OT1Q8N9U9 137 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 OR5M1Q8NGP8 315 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 OR4C6Q8NH72 309 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 IFT81Q8WYA0 676 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 WDR34Q96EX3 536 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 SMIM8Q96KF7 97 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 ZNF285Q96NJ3 590 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 OR2M4Q96R27 311 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 TBL1YQ9BQ87 522 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 WDR54Q9H977 334 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 FBXL12Q9NXK8 326 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 SLC22A14Q9Y267 594 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 PDZD2O15018 2839 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 POLEQ07864 2286 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 PKDREJQ9NTG1 2253 aa3.12□□□□□ -1.91
RFC1-216ENST00000514572 ANKHD1Q8IWZ3 2542 aaKnown RBP3.12□□□□□ -1.91
RFC1-216ENST00000514572 NYNRINQ9P2P1 1898 aaKnown RBP3.11□□□□□ -1.91
RFC1-216ENST00000514572 SEC16AO15027 2179 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 ABCA2Q9BZC7 2435 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 IGLV3-16A0A075B6K0 115 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 FABP12A6NFH5 140 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 CENPBD1B2RD01 187 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 H3BQV1 296 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 SULT1C2O00338 296 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 DHRS3O75911 302 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 HLA-DQB1P01920 261 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 RLN2P04090 185 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 RD3LP0DJH9 198 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 TAC1P20366 129 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 LGALS7P47929 136 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 CST6Q15828 149 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 AP1ARQ63HQ0 302 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 KCTD16Q68DU8 428 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 CRLF3Q8IUI8 442 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 NECAP1Q8NC96 275 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 OR5B17Q8NGF7 314 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 ACTL9Q8TC94 416 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 FAM45AQ8TCE6 357 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 BLNKQ8WV28 456 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 CCDC127Q96BQ5 260 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 L3HYPDHQ96EM0 354 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 TMA16Q96EY4 203 aaKnown RBP3.11□□□□□ -1.91
RFC1-216ENST00000514572 TRIM4Q9C037 500 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 VCXQ9H320 206 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 ASCL3Q9NQ33 180 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 C1orf109Q9NX04 203 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 C21orf62Q9NYP8 219 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 KLK12Q9UKR0 248 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 ATP6V1DQ9Y5K8 247 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 NF1P21359 2839 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 OTOGQ6ZRI0 2925 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 HIVEP1P15822 2718 aa3.11□□□□□ -1.91
RFC1-216ENST00000514572 MED13LQ71F56 2210 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms