RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 LIN7CQ9NUP9 197 aaKnown RBP18.21■□□□□ 0.51
CLDND1-230ENST00000514537 TRBV6-6A0A0A6YYG2 114 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 LINC01548A6NM66 108 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 FOXI3A8MTJ6 420 aaPredicted RBP18.2■□□□□ 0.5
CLDND1-230ENST00000514537 SERPINE3A8MV23 424 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 RGS11O94810 467 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 PF4V1P10720 104 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 PSMD7P51665 324 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 ODF3L1Q8IXM7 274 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 OR51D1Q8NGF3 324 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 OR8H1Q8NGG4 311 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 ABCG5Q9H222 651 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 RIMS4Q9H426 269 aaPredicted RBP18.2■□□□□ 0.5
CLDND1-230ENST00000514537 ABRACLQ9P1F3 81 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 HSF4Q9ULV5 492 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 V9GY05 133 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 DNAH3Q8TD57 4116 aa18.2■□□□□ 0.5
CLDND1-230ENST00000514537 TMEM50BP56557 158 aa18.19■□□□□ 0.5
CLDND1-230ENST00000514537 CLDN12P56749 244 aa18.19■□□□□ 0.5
CLDND1-230ENST00000514537 C2orf76Q3KRA6 126 aa18.19■□□□□ 0.5
CLDND1-230ENST00000514537 OXLD1Q5BKU9 147 aa18.19■□□□□ 0.5
CLDND1-230ENST00000514537 FOXRED2Q8IWF2 684 aa18.19■□□□□ 0.5
CLDND1-230ENST00000514537 FAM3DQ96BQ1 224 aa18.19■□□□□ 0.5
CLDND1-230ENST00000514537 RBMXL1Q96E39 390 aaKnown RBP18.19■□□□□ 0.5
CLDND1-230ENST00000514537 S1PR3Q99500 378 aa18.19■□□□□ 0.5
CLDND1-230ENST00000514537 CHMP1AQ9HD42 196 aaPredicted RBP18.19■□□□□ 0.5
CLDND1-230ENST00000514537 LINC00527Q9UJ94 153 aa18.19■□□□□ 0.5
CLDND1-230ENST00000514537 LDLRAD4O15165 306 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 MRPS14O60783 128 aaKnown RBP18.18■□□□□ 0.5
CLDND1-230ENST00000514537 RANBP1P43487 201 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 GPR12P47775 334 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 F2RL1P55085 397 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 GABARAPL2P60520 117 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 LSAMPQ13449 338 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 KHDC1LQ5JSQ8 128 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 CD200R1LQ6Q8B3 271 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 MOB1BQ7L9L4 216 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 STPG2Q8N412 459 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 AK3Q9UIJ7 227 aa18.18■□□□□ 0.5
CLDND1-230ENST00000514537 TRAV1-2A0A0B4J238 106 aa18.17■□□□□ 0.5
CLDND1-230ENST00000514537 FAM71E2Q8N5Q1 922 aa18.17■□□□□ 0.5
CLDND1-230ENST00000514537 OR2AK2Q8NG84 335 aa18.17■□□□□ 0.5
CLDND1-230ENST00000514537 SETD6Q8TBK2 473 aa18.17■□□□□ 0.5
CLDND1-230ENST00000514537 IL1F10Q8WWZ1 152 aa18.17■□□□□ 0.5
CLDND1-230ENST00000514537 RASL11BQ9BPW5 248 aa18.17■□□□□ 0.5
CLDND1-230ENST00000514537 NDUFB11Q9NX14 153 aa18.17■□□□□ 0.5
CLDND1-230ENST00000514537 STEAP1Q9UHE8 339 aa18.17■□□□□ 0.5
CLDND1-230ENST00000514537 SHISA3A0PJX4 238 aa18.16■□□□□ 0.5
CLDND1-230ENST00000514537 AP4M1O00189 453 aa18.16■□□□□ 0.5
CLDND1-230ENST00000514537 CD33P20138 364 aa18.16■□□□□ 0.5
CLDND1-230ENST00000514537 VEGFCP49767 419 aa18.16■□□□□ 0.5
CLDND1-230ENST00000514537 SLC35B1P78383 322 aa18.16■□□□□ 0.5
CLDND1-230ENST00000514537 ZNF833PQ6ZTB9 187 aa18.16■□□□□ 0.5
CLDND1-230ENST00000514537 COMMD1Q8N668 190 aa18.16■□□□□ 0.5
CLDND1-230ENST00000514537 NABP2Q9BQ15 211 aa18.16■□□□□ 0.5
CLDND1-230ENST00000514537 HDHD3Q9BSH5 251 aaPredicted RBP18.16■□□□□ 0.5
CLDND1-230ENST00000514537 IFI27L2Q9H2X8 130 aa18.16■□□□□ 0.5
CLDND1-230ENST00000514537 TRDV1A0A1B0GX56 115 aa18.15■□□□□ 0.5
CLDND1-230ENST00000514537 PDCD5O14737 125 aa18.15■□□□□ 0.5
CLDND1-230ENST00000514537 DENRO43583 198 aaKnown RBP18.15■□□□□ 0.5
CLDND1-230ENST00000514537 PF4P02776 101 aa18.15■□□□□ 0.5
CLDND1-230ENST00000514537 OR3A3P47888 321 aa18.15■□□□□ 0.5
CLDND1-230ENST00000514537 RPL23AP62750 156 aaKnown RBP18.15■□□□□ 0.5
CLDND1-230ENST00000514537 HES5Q5TA89 166 aa18.15■□□□□ 0.5
CLDND1-230ENST00000514537 ARHGAP5-AS1Q96IT6 56 aa18.15■□□□□ 0.5
CLDND1-230ENST00000514537 PECRQ9BY49 303 aa18.15■□□□□ 0.5
CLDND1-230ENST00000514537 MRPL20Q9BYC9 149 aaKnown RBP18.15■□□□□ 0.5
CLDND1-230ENST00000514537 ZFP57Q9NU63 452 aa18.15■□□□□ 0.5
CLDND1-230ENST00000514537 RAB22AQ9UL26 194 aa18.15■□□□□ 0.5
CLDND1-230ENST00000514537 SAA2-SAA4A0A096LPE2 208 aa18.14■□□□□ 0.49
CLDND1-230ENST00000514537 TMEM272A0A1B0GTI8 110 aa18.14■□□□□ 0.49
CLDND1-230ENST00000514537 SAA2P0DJI9 122 aaPredicted RBP18.14■□□□□ 0.49
CLDND1-230ENST00000514537 PLA2G7Q13093 441 aa18.14■□□□□ 0.49
CLDND1-230ENST00000514537 PLAC9Q5JTB6 97 aa18.14■□□□□ 0.49
CLDND1-230ENST00000514537 OR56B1Q8NGI3 324 aa18.14■□□□□ 0.49
CLDND1-230ENST00000514537 Q9N2K0 584 aa18.14■□□□□ 0.49
CLDND1-230ENST00000514537 SLC23A1Q9UHI7 598 aa18.14■□□□□ 0.49
CLDND1-230ENST00000514537 MGAT4AQ9UM21 535 aa18.14■□□□□ 0.49
CLDND1-230ENST00000514537 ITGB1BP1O14713 200 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 ST8SIA5O15466 376 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 IGLL1P15814 213 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 GALP22466 123 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 OR10A3P58181 314 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 HLA-DRB3P79483 266 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 PNLIPRP3Q17RR3 467 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 UBE2UQ5VVX9 321 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 FAM71F2Q6NXP2 309 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 RITA1Q96K30 269 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 HSPB9Q9BQS6 159 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 ZNF251Q9BRH9 671 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 C12orf4Q9NQ89 552 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 PIPOXQ9P0Z9 390 aa18.13■□□□□ 0.49
CLDND1-230ENST00000514537 IFITM5A6NNB3 132 aa18.12■□□□□ 0.49
CLDND1-230ENST00000514537 RAB29O14966 203 aa18.12■□□□□ 0.49
CLDND1-230ENST00000514537 PRB2P02812 416 aaPredicted RBP18.12■□□□□ 0.49
CLDND1-230ENST00000514537 SOX6P35712 828 aa18.12■□□□□ 0.49
CLDND1-230ENST00000514537 ACTBP60709 375 aa18.12■□□□□ 0.49
CLDND1-230ENST00000514537 TEX38Q6PEX7 206 aa18.12■□□□□ 0.49
CLDND1-230ENST00000514537 SPARTQ8N0X7 666 aa18.12■□□□□ 0.49
CLDND1-230ENST00000514537 PHF21AQ96BD5 680 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms