RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 GEMIN2O14893 280 aaKnown RBP8.52□□□□□ -1.05
RNF4-218ENST00000513284 ATP6V0E1O15342 81 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 CA11O75493 328 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 DEDDO75618 318 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 CDRT1O95170 752 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 PITPNAQ00169 270 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 SLC22A6Q4U2R8 563 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 APH1BQ8WW43 257 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 RTN4IP1Q8WWV3 396 aaPredicted RBP8.52□□□□□ -1.05
RNF4-218ENST00000513284 ST6GALNAC5Q9BVH7 336 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 TMED9Q9BVK6 235 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 PKHD1P08F94 4074 aa8.52□□□□□ -1.05
RNF4-218ENST00000513284 IGHV7-81A0A0B4J1V7 117 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 WBP4O75554 376 aaKnown RBP8.51□□□□□ -1.05
RNF4-218ENST00000513284 LGALS1P09382 135 aaKnown RBP8.51□□□□□ -1.05
RNF4-218ENST00000513284 SLC2A2P11168 524 aaPredicted RBP8.51□□□□□ -1.05
RNF4-218ENST00000513284 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
RNF4-218ENST00000513284 STEAP3Q658P3 488 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 CCDC107Q8WV48 283 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 THRSPQ92748 146 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 SMIM19Q96E16 107 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 RDH12Q96NR8 316 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 TUBA4BQ9H853 241 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 FGF20Q9NP95 211 aaPredicted RBP8.51□□□□□ -1.05
RNF4-218ENST00000513284 ETAA1Q9NY74 926 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 KCNIP1Q9NZI2 227 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 STUB1Q9UNE7 303 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 EXOSC1Q9Y3B2 195 aaKnown RBP8.51□□□□□ -1.05
RNF4-218ENST00000513284 FBXO7Q9Y3I1 522 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 DNAH2Q9P225 4427 aa8.51□□□□□ -1.05
RNF4-218ENST00000513284 IGHV3-43A0A0B4J1X8 118 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 TRAV41A0A0B4J266 112 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 IZUMO1RA6ND01 250 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 C15orf65H3BRN8 121 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 SLC31A2O15432 143 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 BAG2O95816 211 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 MT-ND4P03905 459 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 HSPB1P04792 205 aaKnown RBP8.5□□□□□ -1.05
RNF4-218ENST00000513284 LIMS3P0CW19 117 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 LIMS4P0CW20 117 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 IGHV3-43DP0DP04 118 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 BLVRBP30043 206 aaPredicted RBP8.5□□□□□ -1.05
RNF4-218ENST00000513284 ZNF137PP52743 207 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 TAS2R43P59537 309 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 EWSR1Q01844 656 aaKnown RBP eCLIP8.5□□□□□ -1.056e-6■□□□□ 9.2
RNF4-218ENST00000513284 SMN1Q16637 294 aaKnown RBP8.5□□□□□ -1.05
RNF4-218ENST00000513284 Q499Y3 187 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 YIF1BQ5BJH7 314 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 SYT6Q5T7P8 510 aaPredicted RBP8.5□□□□□ -1.05
RNF4-218ENST00000513284 ZNF497Q6ZNH5 498 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 SLC25A48Q6ZT89 311 aaKnown RBP8.5□□□□□ -1.05
RNF4-218ENST00000513284 ANKRD13BQ86YJ7 626 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 JAGN1Q8N5M9 183 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 ZNF184Q99676 751 aaPredicted RBP8.5□□□□□ -1.05
RNF4-218ENST00000513284 BABAM2Q9NXR7 383 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 SMPD3Q9NY59 655 aaPredicted RBP8.5□□□□□ -1.05
RNF4-218ENST00000513284 ERGIC3Q9Y282 383 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 CEPT1Q9Y6K0 416 aa8.5□□□□□ -1.05
RNF4-218ENST00000513284 FAM90A7PA6NKC0 464 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 FAM90A23PA8MXZ1 464 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 OGG1O15527 345 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 RGS11O94810 467 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 IGHV3-11P01762 117 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 GLAP06280 429 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 EGR2P11161 476 aaPredicted RBP8.49□□□□□ -1.05
RNF4-218ENST00000513284 ZNF134P52741 427 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 NDPQ00604 133 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 MMDQ15546 238 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 AWAT2Q6E213 333 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 ZNF554Q86TJ5 538 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 CDH26Q8IXH8 852 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 PRR18Q8N4B5 295 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 RGP1Q92546 391 aaPredicted RBP8.49□□□□□ -1.05
RNF4-218ENST00000513284 RHOVQ96L33 236 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 ZNF251Q9BRH9 671 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 RSRP1Q9BUV0 290 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 ZNF581Q9P0T4 197 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 RCC2Q9P258 522 aaKnown RBP8.49□□□□□ -1.05
RNF4-218ENST00000513284 MRPS28Q9Y2Q9 187 aaKnown RBP8.49□□□□□ -1.05
RNF4-218ENST00000513284 LRRC42Q9Y546 428 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 DNAH6Q9C0G6 4158 aa8.49□□□□□ -1.05
RNF4-218ENST00000513284 DNAH17Q9UFH2 4485 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 LANCL1O43813 399 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 GPX5O75715 221 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 HLA-DRB1P01911 266 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 HBZP02008 142 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 MECP2P51608 486 aaKnown RBP8.48□□□□□ -1.05
RNF4-218ENST00000513284 OR2G6Q5TZ20 316 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 RAB12Q6IQ22 244 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 GLIPR1L1Q6UWM5 242 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 NKAIN3Q8N8D7 197 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 SETD9Q8NE22 299 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 OR4K15Q8NH41 348 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 UBALD1Q8TB05 177 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 FLYWCH2Q96CP2 140 aaKnown RBP8.48□□□□□ -1.05
RNF4-218ENST00000513284 ELOVL1Q9BW60 279 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 ANKRD60Q9BZ19 345 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 OR2S2Q9NQN1 319 aa8.48□□□□□ -1.05
RNF4-218ENST00000513284 PARP11Q9NR21 331 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms