RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 LY6G6DO95868 133 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 BCL3P20749 454 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 ZNF93P35789 620 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-209ENST00000513148 GLP1RP43220 463 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 OR3A4PP47883 348 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 NPBWR2P48146 333 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 PPT1P50897 306 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 EIF5AP63241 154 aaKnown RBP13.72□□□□□ -0.21
HMGCL-209ENST00000513148 SRSF3P84103 164 aaKnown RBP13.72□□□□□ -0.21
HMGCL-209ENST00000513148 RELQ04864 619 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-209ENST00000513148 KRTAP1-1Q07627 177 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 SMIM21Q3B7S5 101 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 OR10K2Q6IF99 312 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 EIF5AL1Q6IS14 154 aaKnown RBP13.72□□□□□ -0.21
HMGCL-209ENST00000513148 DUX4L9Q6RFH8 374 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-209ENST00000513148 CLEC9AQ6UXN8 241 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 LRRTM1Q86UE6 522 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 JAGN1Q8N5M9 183 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 CPNE2Q96FN4 548 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-209ENST00000513148 CCL13Q99616 98 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 TOLLIPQ9H0E2 274 aa13.72□□□□□ -0.21
HMGCL-209ENST00000513148 IGKV1-12A0A0C4DH73 117 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 TRAPPC2LH3BP13 241 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 PHF1O43189 567 aaPredicted RBP13.71□□□□□ -0.21
HMGCL-209ENST00000513148 IGKV1D-12P01611 117 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 SNU13P55769 128 aaKnown RBP13.71□□□□□ -0.21
HMGCL-209ENST00000513148 LCN2P80188 198 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 CYCSP99999 105 aaKnown RBP13.71□□□□□ -0.21
HMGCL-209ENST00000513148 DHRS2Q13268 280 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 STUMQ69YW2 141 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 OR8B3Q8NGG8 313 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 EMG1Q92979 244 aaKnown RBP13.71□□□□□ -0.21
HMGCL-209ENST00000513148 OR8B2Q96RD0 313 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 ELL3Q9HB65 397 aaPredicted RBP13.71□□□□□ -0.21
HMGCL-209ENST00000513148 CTSZQ9UBR2 303 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 OR14J1Q9UGF5 321 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 ZNF230Q9UIE0 474 aaPredicted RBP13.71□□□□□ -0.21
HMGCL-209ENST00000513148 ABCA1O95477 2261 aa13.71□□□□□ -0.21
HMGCL-209ENST00000513148 TRBV23-1A0A0A0MS06 115 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 TGFAP01135 160 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 WNT2P09544 360 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 GABRA2P47869 451 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 CEBPDP49716 269 aaPredicted RBP13.71□□□□□ -0.22
HMGCL-209ENST00000513148 ERVK11-1P61568 191 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 CYB5R2Q6BCY4 276 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 C1QL2Q7Z5L3 287 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 BIVMQ86UB2 503 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 FAM216BQ8N7L0 139 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 LINC01356Q8N9X3 169 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 RAB3CQ96E17 227 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 NEIL1Q96FI4 390 aaPredicted RBP13.71□□□□□ -0.22
HMGCL-209ENST00000513148 RBM14Q96PK6 669 aaKnown RBP13.71□□□□□ -0.22
HMGCL-209ENST00000513148 SLC2A8Q9NY64 477 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 IL36RNQ9UBH0 155 aa13.71□□□□□ -0.22
HMGCL-209ENST00000513148 CD3DP04234 171 aa13.7□□□□□ -0.22
HMGCL-209ENST00000513148 PSG2P11465 335 aa13.7□□□□□ -0.22
HMGCL-209ENST00000513148 CSPG4Q6UVK1 2322 aa13.7□□□□□ -0.22
HMGCL-209ENST00000513148 SLC25A42Q86VD7 318 aa13.7□□□□□ -0.22
HMGCL-209ENST00000513148 PNLDC1Q8NA58 520 aaKnown RBP13.7□□□□□ -0.22
HMGCL-209ENST00000513148 MITD1Q8WV92 249 aa13.7□□□□□ -0.22
HMGCL-209ENST00000513148 HES4Q9HCC6 221 aa13.7□□□□□ -0.22
HMGCL-209ENST00000513148 IGKV1D-17A0A075B6S4 117 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 B4DSR2 109 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 TXNL1O43396 289 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 FBXO24O75426 580 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 RAB3DO95716 219 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 SFTPBP07988 381 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 SFTA3P0C7M3 94 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 HKR1P10072 659 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 PTHLHP12272 177 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 ADRA2CP18825 462 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 RAB5AP20339 215 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 CLDN12P56749 244 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 TAS2R60P59551 318 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 GNB2P62879 340 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 SSBP3Q9BWW4 388 aaPredicted RBP13.69□□□□□ -0.22
HMGCL-209ENST00000513148 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 CACFD1Q9UGQ2 172 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 TLN2Q9Y4G6 2542 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 ARHGAP32A7KAX9 2087 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 A0A0A6YYH2 397 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 NKX6-3A6NJ46 265 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 A6NJ64 397 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 TNFRSF13BO14836 293 aaPredicted RBP13.69□□□□□ -0.22
HMGCL-209ENST00000513148 MSMBP08118 114 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 FCGR3AP08637 254 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 HOXB5P09067 269 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 AMY2BP19961 511 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 HOXA5P20719 270 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 ZBTB25P24278 435 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 ZFP36P26651 326 aaKnown RBP13.69□□□□□ -0.22
HMGCL-209ENST00000513148 PSMB6P28072 239 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 DVL1P1P54792 670 aaPredicted RBP13.69□□□□□ -0.22
HMGCL-209ENST00000513148 ATPAF1Q5TC12 328 aaPredicted RBP13.69□□□□□ -0.22
HMGCL-209ENST00000513148 LYG2Q86SG7 212 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 Q8IYB0 196 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 FGFRL1Q8N441 504 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 NKAIN3Q8N8D7 197 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 ZDHHC22Q8N966 263 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 FOXRED1Q96CU9 486 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms