RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 THNSL2Q86YJ6 484 aa12.72□□□□□ -0.37
DDX41-214ENST00000512334 TGIF2LXQ8IUE1 241 aa12.72□□□□□ -0.37
DDX41-214ENST00000512334 Q8N2B8 174 aa12.72□□□□□ -0.37
DDX41-214ENST00000512334 RTN4IP1Q8WWV3 396 aaPredicted RBP12.72□□□□□ -0.37
DDX41-214ENST00000512334 CFHR4Q92496 578 aa12.72□□□□□ -0.37
DDX41-214ENST00000512334 PTX4Q96A99 478 aa12.72□□□□□ -0.37
DDX41-214ENST00000512334 RAB27BO00194 218 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 AIREO43918 545 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 YPEL1O60688 119 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 VDAC2P45880 294 aaPredicted RBP12.71□□□□□ -0.37
DDX41-214ENST00000512334 ABCA11PQ4W5N1 156 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 IDNKQ5T6J7 187 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 LGALS14Q8TCE9 139 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 YPEL2Q96QA6 119 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 Q9N2K0 584 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 SLC23A1Q9UHI7 598 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 KCNK7Q9Y2U2 307 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 MOB4Q9Y3A3 225 aa12.71□□□□□ -0.37
DDX41-214ENST00000512334 SH2D7A6NKC9 451 aaPredicted RBP12.7□□□□□ -0.38
DDX41-214ENST00000512334 M0QZK8 103 aa12.7□□□□□ -0.38
DDX41-214ENST00000512334 HSPA12AO43301 675 aa12.7□□□□□ -0.38
DDX41-214ENST00000512334 TXNL1O43396 289 aa12.7□□□□□ -0.38
DDX41-214ENST00000512334 HIST1H1DP16402 221 aaKnown RBP12.7□□□□□ -0.38
DDX41-214ENST00000512334 LSM3P62310 102 aaKnown RBP12.7□□□□□ -0.38
DDX41-214ENST00000512334 TMEM95Q3KNT9 176 aa12.7□□□□□ -0.38
DDX41-214ENST00000512334 C9orf152Q5JTZ5 239 aa12.7□□□□□ -0.38
DDX41-214ENST00000512334 C11orf44Q8N8P7 122 aa12.7□□□□□ -0.38
DDX41-214ENST00000512334 ST6GALNAC6Q969X2 333 aa12.7□□□□□ -0.38
DDX41-214ENST00000512334 YIPF6Q96EC8 236 aa12.7□□□□□ -0.38
DDX41-214ENST00000512334 SERTAD4Q9NUC0 356 aa12.7□□□□□ -0.38
DDX41-214ENST00000512334 M0QZ24 198 aa12.69□□□□□ -0.38
DDX41-214ENST00000512334 MFNGO00587 321 aa12.69□□□□□ -0.38
DDX41-214ENST00000512334 SCTP09683 121 aa12.69□□□□□ -0.38
DDX41-214ENST00000512334 ZBTB25P24278 435 aa12.69□□□□□ -0.38
DDX41-214ENST00000512334 ZNF137PP52743 207 aa12.69□□□□□ -0.38
DDX41-214ENST00000512334 ARFRP1Q13795 201 aa12.69□□□□□ -0.38
DDX41-214ENST00000512334 HERPUD1Q15011 391 aa12.69□□□□□ -0.38
DDX41-214ENST00000512334 PRR31Q5SQ13 230 aa12.69□□□□□ -0.38
DDX41-214ENST00000512334 SERPINE3A8MV23 424 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 TRDCB7Z8K6 153 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 ST8SIA5O15466 376 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 FCGR3AP08637 254 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 CD1BP29016 333 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 TGFBR1P36897 503 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 TALDO1P37837 337 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 CEACAM6P40199 344 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 ARL6IP1Q15041 203 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 LY6G6FQ5SQ64 297 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 IZUMO1Q8IYV9 350 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 OR2T10Q8NGZ9 312 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 EAF1Q96JC9 268 aaPredicted RBP12.68□□□□□ -0.38
DDX41-214ENST00000512334 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
DDX41-214ENST00000512334 SAA2-SAA4A0A096LPE2 208 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 TRIM64CA6NLI5 447 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 NCBP2LA6PVI3 153 aaKnown RBP12.67□□□□□ -0.38
DDX41-214ENST00000512334 ZNF736B4DX44 427 aaPredicted RBP12.67□□□□□ -0.38
DDX41-214ENST00000512334 LANCL1O43813 399 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 SCGNO76038 276 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 AMY1AP04745 511 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 AMY2AP04746 511 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 SAA2P0DJI9 122 aaPredicted RBP12.67□□□□□ -0.38
DDX41-214ENST00000512334 OR3A3P47888 321 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 CDNFQ49AH0 187 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 HIST2H2BDQ6DRA6 164 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 ODF3L1Q8IXM7 274 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 MAFIPQ8WZ33 124 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 PHF21AQ96BD5 680 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 PARP12Q9H0J9 701 aaKnown RBP12.67□□□□□ -0.38
DDX41-214ENST00000512334 IFI27L2Q9H2X8 130 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 RHBDL2Q9NX52 303 aa12.67□□□□□ -0.38
DDX41-214ENST00000512334 ZNF230Q9UIE0 474 aaPredicted RBP12.67□□□□□ -0.38
DDX41-214ENST00000512334 FABP7O15540 132 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 MOSP00540 346 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 LSAMPQ13449 338 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 EBI3Q14213 229 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 KIR2DS1Q14954 304 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 TREML4Q6UXN2 200 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 C5orf56Q8N8D9 126 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 OR4A4PQ8NGN8 299 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 OR5H6Q8NGV6 325 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 EDARADDQ8WWZ3 215 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 FUNDC2Q9BWH2 189 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 MRPL20Q9BYC9 149 aaKnown RBP12.66□□□□□ -0.38
DDX41-214ENST00000512334 PIPOXQ9P0Z9 390 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 ELF5Q9UKW6 265 aaPredicted RBP12.66□□□□□ -0.38
DDX41-214ENST00000512334 ETV7Q9Y603 341 aa12.66□□□□□ -0.38
DDX41-214ENST00000512334 TET2Q6N021 2002 aaPredicted RBP12.66□□□□□ -0.38
DDX41-214ENST00000512334 IGKV1-6A0A0C4DH72 117 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 RAB29O14966 203 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 BET1O15155 118 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 FGF16O43320 207 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 FBXO24O75426 580 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 GSTT2P0CG29 244 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 GSTT2BP0CG30 244 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 SCAND1P57086 179 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 C2orf68Q2NKX9 166 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 ZNF833PQ6ZTB9 187 aa12.65□□□□□ -0.38
DDX41-214ENST00000512334 CENPVQ7Z7K6 275 aaPredicted RBP12.65□□□□□ -0.38
DDX41-214ENST00000512334 CROCCP3Q8IVE0 287 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms