RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 RTBDNQ9BSG5 229 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 SAP30LQ9HAJ7 183 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 RAB9BQ9NP90 201 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 UFSP2Q9NUQ7 469 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 KAAG1Q9UBP8 84 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 RYR3Q15413 4870 aa8.63□□□□□ -1.03
PDLIM5-217ENST00000512274 TANC2Q9HCD6 1990 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 WNK1Q9H4A3 2382 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 TRAV38-1A0A0B4J264 116 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 IGHV3-64DA0A0J9YX35 117 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 OOEPA6NGQ2 149 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 DBX1A6NMT0 343 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 TMEM178BH3BS89 294 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 SIRPB1O00241 398 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 TNFRSF13BO14836 293 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 SIGLEC5O15389 551 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 B3GALNT1O75752 331 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 RGS11O94810 467 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 TSPAN15O95858 294 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 C1QBP02746 253 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 RLN1P04808 185 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 RNASE1P07998 156 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 GIPP09681 153 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 GSTT2P0CG29 244 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 ANXA3P12429 323 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 IRF2P14316 349 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 RPS2P15880 293 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 HTD2P86397 168 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 HERPUD1Q15011 391 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 FCN2Q15485 313 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 AVPI1Q5T686 147 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 H1FOOQ8IZA3 346 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 MUC20Q8N307 709 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 OR11H7Q8NGC8 314 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 MARCH1Q8TCQ1 289 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 NEK7Q8TDX7 302 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 COQ2Q96H96 371 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 ZNF48Q96MX3 618 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 ZNF2Q9BSG1 426 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 RSRP1Q9BUV0 290 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 ZNF665Q9H7R5 613 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 CHMP1AQ9HD42 196 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 DNAJB11Q9UBS4 358 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 ZNF69Q9UC07 566 aa8.62□□□□□ -1.03
PDLIM5-217ENST00000512274 IGKV1-6A0A0C4DH72 117 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 C9orf170A2RU37 121 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 G3V4G9 280 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 J3QLI3 93 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 ITGB1BP1O14713 200 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 FSHBP01225 129 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 PPYP01298 95 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 CGB3P0DN86 165 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 CGB7P0DN87 165 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 GZMHP20718 246 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 KRTAP10-3P60369 221 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 COL10A1Q03692 680 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 PDCD1Q15116 288 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 SLC9A3R2Q15599 337 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 KCTD9Q7L273 389 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 LDLRAD3Q86YD5 345 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 C12orf45Q8N5I9 185 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 LRTM2Q8N967 370 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 OR2AK2Q8NG84 335 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 MRAPQ8TCY5 172 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 MAFIPQ8WZ33 124 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 CORO2AQ92828 525 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 TMEM230Q96A57 120 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 CITED1Q99966 193 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 FXYD6Q9H0Q3 95 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 TMEM106BQ9NUM4 274 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 OR6C3Q9NZP0 311 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 C14orf166Q9Y224 244 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 OR2W1Q9Y3N9 320 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 MAB21L2Q9Y586 359 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 WNK2Q9Y3S1 2297 aa8.61□□□□□ -1.03
PDLIM5-217ENST00000512274 CRYM-AS1A6NIL9 109 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 C3orf80F5H4A9 247 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 SDCBPO00560 298 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 SSNA1O43805 119 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 SLC22A5O76082 557 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 SFT2D2O95562 160 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 HLA-AP01891 365 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 SCTP09683 121 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 ZNF728P0DKX0 622 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 FCGR2CP31995 323 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 NPY4RP50391 375 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 P2RX3P56373 397 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 RAP2BP61225 183 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 SUPT4H1P63272 117 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 HOXA4Q00056 320 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 CBX3Q13185 183 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 PPP1R1AQ13522 171 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 BEAN1Q3B7T3 259 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 Q3ZCU0 254 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 C4orf46Q504U0 113 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 BATF2Q8N1L9 274 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 CAPSLQ8WWF8 208 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 KIRREL1Q96J84 757 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 AKR1E2Q96JD6 320 aa8.6□□□□□ -1.03
PDLIM5-217ENST00000512274 PHB2Q99623 299 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms