RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 EBI3Q14213 229 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 MOGAT2Q3SYC2 334 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 PLAC9Q5JTB6 97 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 ZNF554Q86TJ5 538 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 ODF3L1Q8IXM7 274 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 GALMQ96C23 342 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
DDX41-213ENST00000512027 TRAV1-2A0A0B4J238 106 aa13.06□□□□□ -0.32
DDX41-213ENST00000512027 LINC01548A6NM66 108 aa13.06□□□□□ -0.32
DDX41-213ENST00000512027 NCBP2LA6PVI3 153 aaKnown RBP13.06□□□□□ -0.32
DDX41-213ENST00000512027 PDCD5O14737 125 aa13.06□□□□□ -0.32
DDX41-213ENST00000512027 SLC2A2P11168 524 aaPredicted RBP13.06□□□□□ -0.32
DDX41-213ENST00000512027 RAB3BP20337 219 aa13.06□□□□□ -0.32
DDX41-213ENST00000512027 NDUFA11Q86Y39 141 aa13.06□□□□□ -0.32
DDX41-213ENST00000512027 OR2T10Q8NGZ9 312 aa13.06□□□□□ -0.32
DDX41-213ENST00000512027 MRPL20Q9BYC9 149 aaKnown RBP13.06□□□□□ -0.32
DDX41-213ENST00000512027 ABRACLQ9P1F3 81 aa13.06□□□□□ -0.32
DDX41-213ENST00000512027 OR1A1Q9P1Q5 309 aa13.06□□□□□ -0.32
DDX41-213ENST00000512027 LRRC42Q9Y546 428 aa13.06□□□□□ -0.32
DDX41-213ENST00000512027 IFITM5A6NNB3 132 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 ST8SIA5O15466 376 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 FGF16O43320 207 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 YPEL1O60688 119 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 CD1BP29016 333 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 HLA-DRB3P79483 266 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 CD83Q01151 205 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 LSAMPQ13449 338 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 ZNF773Q6PK81 442 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 ZNF329Q86UD4 541 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 OR56B1Q8NGI3 324 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 YPEL2Q96QA6 119 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 YTHDF1Q9BYJ9 559 aaKnown RBP13.05□□□□□ -0.32
DDX41-213ENST00000512027 OR51E2Q9H255 320 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 IFI27L2Q9H2X8 130 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 TXNL4BQ9NX01 149 aaKnown RBP13.05□□□□□ -0.32
DDX41-213ENST00000512027 HSF4Q9ULV5 492 aa13.05□□□□□ -0.32
DDX41-213ENST00000512027 A0A075B6Q4 140 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 SAA2-SAA4A0A096LPE2 208 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 G3V4G9 280 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 TXNL1O43396 289 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 LANCL1O43813 399 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 MOSP00540 346 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 OPN1MWP04001 364 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 SCTP09683 121 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 SAA2P0DJI9 122 aaPredicted RBP13.04□□□□□ -0.32
DDX41-213ENST00000512027 OPN1MW2P0DN77 364 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 OPN1MW3P0DN78 364 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 PSMD7P51665 324 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 F2RL1P55085 397 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 NEDD8Q15843 81 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 KHDC1LQ5JSQ8 128 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 MOB1BQ7L9L4 216 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 Q8N9W7 124 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 OR2AK2Q8NG84 335 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 CMSS1Q9BQ75 279 aaKnown RBP13.04□□□□□ -0.32
DDX41-213ENST00000512027 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 Q9N2K0 584 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 C12orf4Q9NQ89 552 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 PLSCR3Q9NRY6 295 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 SLC23A1Q9UHI7 598 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 KCNK7Q9Y2U2 307 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 TGP01266 2768 aa13.04□□□□□ -0.32
DDX41-213ENST00000512027 PRKDCP78527 4128 aaKnown RBP13.03□□□□□ -0.32
DDX41-213ENST00000512027 TRBV6-6A0A0A6YYG2 114 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 TCRBV4S1A1TA0A5B7 111 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 PSMB11A5LHX3 300 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 RGS11O94810 467 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 CNTFRP26992 372 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 RPL39P5Q59GN2 51 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 STEAP3Q658P3 488 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 SLC35E3Q7Z769 313 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 MAFIPQ8WZ33 124 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 FCGR1BQ92637 280 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 ABHD14BQ96IU4 210 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 RITA1Q96K30 269 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 NABP2Q9BQ15 211 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 HSPB9Q9BQS6 159 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 RAB22AQ9UL26 194 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 STUB1Q9UNE7 303 aa13.03□□□□□ -0.32
DDX41-213ENST00000512027 IGKV1-6A0A0C4DH72 117 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 IGHG2P01859 326 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 CLEC2LP0C7M8 214 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 GNB3P16520 340 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 GALP22466 123 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 GPR12P47775 334 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 ZNF833PQ6ZTB9 187 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 OR4X2Q8NGF9 303 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 OR10R2Q8NGX6 335 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 RAB3CQ96E17 227 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 S1PR3Q99500 378 aa13.02□□□□□ -0.33
DDX41-213ENST00000512027 RIMS4Q9H426 269 aaPredicted RBP13.02□□□□□ -0.33
DDX41-213ENST00000512027 RAB27BO00194 218 aa13.01□□□□□ -0.33
DDX41-213ENST00000512027 CD3GP09693 182 aa13.01□□□□□ -0.33
DDX41-213ENST00000512027 FGF9P31371 208 aaPredicted RBP13.01□□□□□ -0.33
DDX41-213ENST00000512027 LY6G6FQ5SQ64 297 aa13.01□□□□□ -0.33
DDX41-213ENST00000512027 GLDNQ6ZMI3 551 aaPredicted RBP13.01□□□□□ -0.33
DDX41-213ENST00000512027 C18orf65Q6ZTR6 163 aa13.01□□□□□ -0.33
DDX41-213ENST00000512027 FAM71E2Q8N5Q1 922 aa13.01□□□□□ -0.33
DDX41-213ENST00000512027 OR4F17Q8NGA8 305 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms