RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 RASL12Q9NYN1 266 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 DOK5Q9P104 306 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 OR1A1Q9P1Q5 309 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 C14orf166Q9Y224 244 aaKnown RBP2.72□□□□□ -1.97
NUP54-209ENST00000510569 PSME4Q14997 1843 aa2.72□□□□□ -1.97
NUP54-209ENST00000510569 FAM240AA0A1B0GVK7 77 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 SULT2B1O00204 365 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 MFNGO00587 321 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 SLC22A1O15245 554 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 RAD51CO43502 376 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 MGRN1O60291 552 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 STK16O75716 305 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 OR2J2O76002 312 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 OR7C1O76099 320 aaPredicted RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 ARG1P05089 322 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 S100A8P05109 93 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 PAEPP09466 180 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 SULT1A3P0DMM9 295 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 SULT1A4P0DMN0 295 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 GPX2P18283 190 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 GABRG2P18507 467 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 GZMHP20718 246 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 ADORA2BP29275 332 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 CASP1P29466 404 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 AKR1C3P42330 323 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 GALR1P47211 349 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 FABP6P51161 128 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 SUB1P53999 127 aaKnown RBP eCLIP2.71□□□□□ -1.98
NUP54-209ENST00000510569 RAB5BP61020 215 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 NAA20P61599 178 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 IFITM2Q01629 132 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 SLC25A11Q02978 314 aaKnown RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 SURF2Q15527 256 aaPredicted RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 ZNF630Q2M218 657 aaPredicted RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 FBXW9Q5XUX1 488 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 ZNF57Q68EA5 555 aaPredicted RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 RASSF6Q6ZTQ3 369 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 CBLN2Q8IUK8 224 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 EIF4E3Q8N5X7 224 aaKnown RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 ZNF557Q8N988 423 aaPredicted RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 ZNF439Q8NDP4 499 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 OR2T33Q8NG76 320 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 OR4X1Q8NH49 305 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 SDR42E1Q8WUS8 393 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 TRUB1Q8WWH5 349 aaKnown RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 ARPC1AQ92747 370 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 CMTM7Q96FZ5 175 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 P2RX4Q99571 388 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 MRPL45Q9BRJ2 306 aaKnown RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 TAPBPLQ9BX59 468 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 COA1Q9GZY4 146 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 LRTM1Q9HBL6 345 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 COA4Q9NYJ1 87 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 OPTCQ9UBM4 332 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 RAB22AQ9UL26 194 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 SNX12Q9UMY4 172 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 CARHSP1Q9Y2V2 147 aaKnown RBP2.71□□□□□ -1.98
NUP54-209ENST00000510569 ADAMTSL1Q8N6G6 1762 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 THSD7BQ9C0I4 1608 aa2.71□□□□□ -1.98
NUP54-209ENST00000510569 SLX4Q8IY92 1834 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 IGLV3-22A0A075B6J6 115 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 A0A087WUJ7 227 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 A0A0U1RQV1 116 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 EXOC1LA0A1B0GW35 172 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 C9orf170A2RU37 121 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 C5orf58C9J3I9 102 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 GABRPO00591 440 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 MBTPS2O43462 519 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 TPST1O60507 370 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 RDH16O75452 317 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 PDYNP01213 254 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 HTR1AP08908 422 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 CD99P14209 185 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 RAB3AP20336 220 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 USF1P22415 310 aaPredicted RBP2.7□□□□□ -1.98
NUP54-209ENST00000510569 GPM6AP51674 278 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 RHOBP62745 196 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 PSG4Q00888 419 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 BAXQ07812 192 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 IHHQ14623 411 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 PMVKQ15126 192 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 RSU1Q15404 277 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 OR7A5Q15622 319 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 ZNF726P1Q15940 193 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 PARP15Q460N3 678 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 TMEM128Q5BJH2 165 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 TNFAIP8L3Q5GJ75 292 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 TMEM78Q5T7P6 136 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 C1orf195Q5TG92 126 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 SAMD13Q5VXD3 122 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 TEX36Q5VZQ5 186 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 SLC16A13Q7RTY0 426 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 COMMD7Q86VX2 200 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 ZBTB8OSQ8IWT0 167 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 C1orf158Q8N1D5 194 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 GAPTQ8N292 157 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 TMEM86BQ8N661 226 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 UBAC2Q8NBM4 344 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 OR10G9Q8NGN4 311 aa2.7□□□□□ -1.98
NUP54-209ENST00000510569 OR2A1Q8NGT9 310 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms