RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 NGFP01138 241 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 PTAFRP25105 342 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 ATP6V0CP27449 155 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 MDH2P40926 338 aaKnown RBP13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 FHITP49789 147 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 C4orf17Q53FE4 359 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 DPPA3Q6W0C5 159 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 H1FOOQ8IZA3 346 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 FAM58AQ8N1B3 248 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 OR2G3Q8NGZ4 309 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 HIST1H2BAQ96A08 127 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 KCNJ16Q9NPI9 418 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 RPS10P5Q9NQ39 176 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 CCL28Q9NRJ3 127 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 TREM2Q9NZC2 230 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 IL36RNQ9UBH0 155 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 OR2W1Q9Y3N9 320 aa13.56□□□□□ -0.24
SQSTM1-213ENST00000510187 CFAP46Q8IYW2 2715 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 C7orf77A4D0Y5 90 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 HSD17B6O14756 317 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 C1QL1O75973 258 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 ZNF44P15621 663 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 CBR1P16152 277 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 ZNF14P17017 642 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 F2RP25116 425 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 ASCL1P50553 236 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 IDH3GP51553 393 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 CLINT1Q14677 625 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 OR1J1Q8NGS3 322 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 CA5BP1Q8WTZ4 195 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 CLCC1Q96S66 551 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 UNKLQ9H9P5 680 aaKnown RBP13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 SLC25A15Q9Y619 301 aa13.55□□□□□ -0.24
SQSTM1-213ENST00000510187 TRAV24A0A0B4J272 114 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 A0A1B0GU03 582 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 C1orf196B1AJZ1 125 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 CELA3BP08861 270 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 CCKARP32238 428 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 WNT5AP41221 380 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 SHEQ5VZ18 495 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 ALKBH2Q6NS38 261 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 OR10J5Q8NHC4 309 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 TMEM171Q8WVE6 324 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 MUCL1Q96DR8 90 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 OR51I2Q9H344 312 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 COA4Q9NYJ1 87 aa13.54□□□□□ -0.24
SQSTM1-213ENST00000510187 ZNF98A6NK75 572 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 WRBO00258 174 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 DFFBO76075 338 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 IGKV3-15P01624 115 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 PPP1CCP36873 323 aaKnown RBP13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 AKR1D1P51857 326 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 HABP2Q14520 560 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 TBC1D28Q2M2D7 210 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 MYPOPQ86VE0 399 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 Q8IYB0 196 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 OR5C1Q8NGR4 320 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 ATP5SQ99766 215 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 KIAA1456Q9P272 454 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 RNF115Q9Y4L5 304 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 M0R036 132 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 HSPB6O14558 160 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 SNRNP70P08621 437 aaKnown RBP13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 RPL35P42766 123 aaKnown RBP13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 DYNLT3P51808 116 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 SP5Q6BEB4 398 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 ODF3L1Q8IXM7 274 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 SFT2D1Q8WV19 159 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 LSM10Q969L4 123 aaKnown RBP13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 RAB40CQ96S21 281 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 ESRP2Q9H6T0 727 aaKnown RBP13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 FBXO7Q9Y3I1 522 aa13.53□□□□□ -0.24
SQSTM1-213ENST00000510187 ARID1AO14497 2285 aa13.52□□□□□ -0.24
SQSTM1-213ENST00000510187 HBE1P02100 147 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 CDSNQ15517 529 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 FBXL19-AS1Q494R0 122 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 SPSB3Q6PJ21 355 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 ETV3LQ6ZN32 361 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 STX12Q86Y82 276 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 ZNF561Q8N587 486 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 OR10V1Q8NGI7 309 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 MALSU1Q96EH3 234 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 RTL8AQ9BWD3 113 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 TAAR3PQ9P1P4 343 aa13.52□□□□□ -0.25
SQSTM1-213ENST00000510187 RBFOX3A6NFN3 312 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 CHST1O43916 411 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 TMEM50AO95807 157 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 IGLV1-44P01699 117 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 SERPINE2P07093 398 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 AGAP20933 346 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 MAS1LP35410 378 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 RAB2AP61019 212 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 RPL23AP62750 156 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 AKIRIN2Q53H80 203 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 Q6P435 159 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 C20orf204Q6ZNR8 217 aa13.51□□□□□ -0.25
SQSTM1-213ENST00000510187 C22orf34Q6ZV56 151 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms