RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 ZNF254O75437 659 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 APOL3O95236 402 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 SOX14O95416 240 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 GZMHP20718 246 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 RIDAP52758 137 aaKnown RBP6.92□□□□□ -1.3
PTPN20-221ENST00000509599 RPS16P62249 146 aaKnown RBP6.92□□□□□ -1.3
PTPN20-221ENST00000509599 PLGLAQ15195 96 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 KRTAP5-3Q6L8H2 238 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 ZNF562Q6V9R5 426 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 PLEKHG7Q6ZR37 379 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 ZNF367Q7RTV3 350 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 OR9Q2Q8NGE9 314 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 FRZBQ92765 325 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 CLCC1Q96S66 551 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 SCRT1Q9BWW7 348 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 MOB1AQ9H8S9 216 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 MDFICQ9P1T7 246 aa6.92□□□□□ -1.3
PTPN20-221ENST00000509599 GSTA4O15217 222 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 MAGEB4O15481 346 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-221ENST00000509599 CA2P00918 260 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 NCK1P16333 377 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 XGP55808 180 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 LIPEQ05469 1076 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 ODF4Q2M2E3 257 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 COQ5Q5HYK3 327 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 ODF3L1Q8IXM7 274 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 OR10V1Q8NGI7 309 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 OR5D18Q8NGL1 313 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 OR1L6Q8NGR2 347 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 GRPEL2Q8TAA5 225 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 KCNG3Q8TAE7 436 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 CNIH3Q8TBE1 160 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 FAM162AQ96A26 154 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 USMG5Q96IX5 58 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 YIPF3Q9GZM5 350 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 R4GMQ9 66 aa6.91□□□□□ -1.3
PTPN20-221ENST00000509599 TMEM213A2RRL7 107 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 GASTP01350 101 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 RRM2P31350 389 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 OR3A3P47888 321 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 SSBP2P81877 361 aaPredicted RBP6.9□□□□□ -1.3
PTPN20-221ENST00000509599 ODF3L2Q3SX64 289 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 UBE2DNLQ8IWF7 75 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 OR2C3Q8N628 320 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 IQCF1Q8N6M8 205 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 Q8NAQ8 132 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 OR4A5Q8NH83 315 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 GALNT14Q96FL9 552 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 APOL4Q9BPW4 351 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 NDUFAF3Q9BU61 184 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 RHOFQ9HBH0 211 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 ZNF581Q9P0T4 197 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 IKZF2Q9UKS7 526 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 DMRT1Q9Y5R6 373 aa6.9□□□□□ -1.3
PTPN20-221ENST00000509599 RNF213Q63HN8 5207 aa6.9□□□□□ -1.31
PTPN20-221ENST00000509599 PRODHO43272 600 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 SYT7O43581 403 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 ORC5O43913 435 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 SERPINA3P01011 423 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 HLA-AP01891 365 aaKnown RBP6.89□□□□□ -1.31
PTPN20-221ENST00000509599 SEMG1P04279 462 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 SCTP09683 121 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 SLC2A5P22732 501 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 KCNJ3P48549 501 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 FXYD3Q14802 87 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 STEAP3Q658P3 488 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 BTNL8Q6UX41 500 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 FAM131AQ6UXB0 335 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 UXS1Q8NBZ7 420 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 BBS1Q8NFJ9 593 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 CCDC107Q8WV48 283 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 ADAT3Q96EY9 351 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-221ENST00000509599 NR1H4Q96RI1 486 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-221ENST00000509599 CHRDL1Q9BU40 450 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 CSTL1Q9H114 145 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 GNG12Q9UBI6 72 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 ZNF230Q9UIE0 474 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-221ENST00000509599 SNX5Q9Y5X3 404 aa6.89□□□□□ -1.31
PTPN20-221ENST00000509599 DEFB131BA0A096LNP1 70 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.88□□□□□ -1.31
PTPN20-221ENST00000509599 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 MPTX1A8MV57 137 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 PPP5D1E7EU14 171 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 NME4O00746 187 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 IFNA21P01568 189 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 IFNA17P01571 189 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 MRPL3P09001 348 aaKnown RBP6.88□□□□□ -1.31
PTPN20-221ENST00000509599 ATF1P18846 271 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 PRKACBP22694 351 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 MAGEA2P43356 314 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 EXOSC2Q13868 293 aaKnown RBP6.88□□□□□ -1.31
PTPN20-221ENST00000509599 ZNF833PQ6ZTB9 187 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 SAXO1Q8IYX7 474 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 OR5B3Q8NH48 314 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 ASB17Q8WXJ9 295 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 PP6455Q8WZ26 134 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 THRSPQ92748 146 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 OPALINQ96PE5 141 aa6.88□□□□□ -1.31
PTPN20-221ENST00000509599 IL1RAPQ9NPH3 570 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms