RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 A0A0U1RQK1 487 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 ODF3BA8MYP8 253 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 ZNF736B4DX44 427 aaPredicted RBP12.06□□□□□ -0.48
RNF4-213ENST00000509388 BUB1B-PAK6H3BSN5 160 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 IGLV1-47P01700 117 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 PMP2P02689 132 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 FBP1P09467 338 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 FAM157CP0CG43 387 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 NAT1P18440 290 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 RAB7AP51149 207 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 ZNF45Q02386 682 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 HERPUD1Q15011 391 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 CDK10Q15131 360 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 LY6G6FQ5SQ64 297 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 UTF1Q5T230 341 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 C9orf139Q6ZV77 190 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 BCL6BQ8N143 479 aaPredicted RBP12.06□□□□□ -0.48
RNF4-213ENST00000509388 LYG1Q8N1E2 194 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 Q8N402 240 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 LINC00311Q8N616 119 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 OR4P4Q8NGL7 312 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 SNAPC3Q92966 411 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 THAP7Q9BT49 309 aaPredicted RBP12.06□□□□□ -0.48
RNF4-213ENST00000509388 TAS2R8Q9NYW2 309 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 ANAPC10Q9UM13 185 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 V9GYH0 126 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 TLN2Q9Y4G6 2542 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 KIAA2026Q5HYC2 2103 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 GSTZ1O43708 216 aaPredicted RBP12.05□□□□□ -0.48
RNF4-213ENST00000509388 IFNA6P05013 189 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 CSF1P09603 554 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 OR5H8P0DN80 308 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 INPP1P49441 399 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 ARHGDIBP52566 201 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 TAS2R19P59542 299 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 TSPAN5P62079 268 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 SSX2Q16385 188 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 ACTBL2Q562R1 376 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 CT45A1Q5HYN5 189 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 SLC25A48Q6ZT89 311 aaKnown RBP12.05□□□□□ -0.48
RNF4-213ENST00000509388 LHFPL4Q7Z7J7 247 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 CT45A3Q8NHU0 189 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 S100ZQ8WXG8 99 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 RPEQ96AT9 228 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 MALSU1Q96EH3 234 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 C11orf54Q9H0W9 315 aaPredicted RBP12.05□□□□□ -0.48
RNF4-213ENST00000509388 EHFQ9NZC4 300 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 HILPDAQ9Y5L2 63 aa12.05□□□□□ -0.48
RNF4-213ENST00000509388 J3QRK9 145 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 ITGB1BP1O14713 200 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 SLC31A2O15432 143 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 ST8SIA5O15466 376 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 NFYAP23511 347 aaPredicted RBP12.04□□□□□ -0.48
RNF4-213ENST00000509388 FCGR2CP31995 323 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 HRH1P35367 487 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 RFX2P48378 723 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 ZNF134P52741 427 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 DEFB112Q30KQ8 113 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 LYSMD2Q8IV50 215 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 GDPD1Q8N9F7 314 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 TMEM229BQ8NBD8 167 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 ZNF439Q8NDP4 499 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 ZNF418Q8TF45 676 aaPredicted RBP12.04□□□□□ -0.48
RNF4-213ENST00000509388 SLC6A7Q99884 636 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 GHITMQ9H3K2 345 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 PIPOXQ9P0Z9 390 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 ZNRD1Q9P1U0 126 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 ZNF107Q9UII5 783 aaPredicted RBP12.04□□□□□ -0.48
RNF4-213ENST00000509388 ZNF221Q9UK13 617 aa12.04□□□□□ -0.48
RNF4-213ENST00000509388 SOX21Q9Y651 276 aaPredicted RBP12.04□□□□□ -0.48
RNF4-213ENST00000509388 OR8U9P0C7N5 309 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 TBPP20226 339 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 GPR12P47775 334 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 LUMP51884 338 aaPredicted RBP12.03□□□□□ -0.48
RNF4-213ENST00000509388 ZNF79Q15937 498 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 RNASE10Q5GAN6 216 aaKnown RBP12.03□□□□□ -0.48
RNF4-213ENST00000509388 TPTE2P1Q5T6R2 138 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 TRIQKQ629K1 86 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 CCDC144NLQ6NUI1 221 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 OVCH2Q7RTZ1 564 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 TMEM17Q86X19 198 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 H1FOOQ8IZA3 346 aaPredicted RBP12.03□□□□□ -0.48
RNF4-213ENST00000509388 OR6F1Q8NGZ6 308 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 OR8U1Q8NH10 309 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 TOMM40LQ969M1 308 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 S1PR3Q99500 378 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 SRRQ9GZT4 340 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 TOLLIPQ9H0E2 274 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 ABCB10Q9NRK6 738 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 RNF150Q9ULK6 438 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 OR2W1Q9Y3N9 320 aa12.03□□□□□ -0.48
RNF4-213ENST00000509388 DSCAML1Q8TD84 2053 aa12.02□□□□□ -0.48
RNF4-213ENST00000509388 OOSP1A8MZH6 123 aa12.02□□□□□ -0.49
RNF4-213ENST00000509388 RAB29O14966 203 aa12.02□□□□□ -0.49
RNF4-213ENST00000509388 CD3DP04234 171 aa12.02□□□□□ -0.49
RNF4-213ENST00000509388 GAPDHP04406 335 aaKnown RBP12.02□□□□□ -0.49
RNF4-213ENST00000509388 AP3S2P59780 193 aa12.02□□□□□ -0.49
RNF4-213ENST00000509388 HERV-K104P61576 105 aa12.02□□□□□ -0.49
RNF4-213ENST00000509388 DYRK1AQ13627 763 aa12.02□□□□□ -0.49
RNF4-213ENST00000509388 PLA1AQ53H76 456 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms