RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 ATOH7Q8N100 152 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 KLHDC3Q9BQ90 382 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 WDR61Q9GZS3 305 aaKnown RBP8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 CLEC5AQ9NY25 188 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 TAAR3PQ9P1P4 343 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 TIMM9Q9Y5J7 89 aa8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 RANBP2P49792 3224 aaKnown RBP8.57□□□□□ -1.04
PDGFRA-207ENST00000509092 FCN1O00602 326 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 PAGE4O60829 102 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 ADH1BP00325 375 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 CA2P00918 260 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 PPIAL4GP0DN37 164 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 SEC13P55735 322 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 MPV17L2Q567V2 206 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 HAPLN4Q86UW8 402 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 VN1R3Q9BXE9 311 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 LTBP2Q14767 1821 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 G3V3Y1 287 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 GOSR1O95249 250 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 EFEMP2O95967 443 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 HBG1P69891 147 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 HBG2P69892 147 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 ZNF90Q03938 601 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 RNPS1Q15287 305 aaKnown RBP8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 BVES-AS1Q5T3Y7 98 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 OR10P1Q8NGE3 313 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 IRF7Q92985 503 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 BORCS7Q96B45 105 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 TIMM29Q9BSF4 260 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 SLC25A22Q9H936 323 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 PSG11Q9UQ72 335 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 ARHGAP21Q5T5U3 1957 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 SHANK1Q9Y566 2161 aa8.56□□□□□ -1.04
PDGFRA-207ENST00000509092 IGKV1D-43A0A0B4J1Z2 117 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 C11orf94C9JXX5 98 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 DEGS1O15121 323 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 PDE6DO43924 150 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 PPYP01298 95 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 OTX1P32242 354 aaPredicted RBP8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 ZNF83P51522 516 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 ZNF121P58317 390 aaPredicted RBP8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 OR1B1Q8NGR6 318 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 OR1N2Q8NGR9 330 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 OR2Y1Q8NGV0 311 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 FAM216AQ8WUB2 273 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 LIN37Q96GY3 246 aaPredicted RBP8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 CCDC3Q9BQI4 270 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 PLSCR4Q9NRQ2 329 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 PEF1Q9UBV8 284 aaKnown RBP8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 WASHC3Q9Y3C0 194 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 LHFPL6Q9Y693 200 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 THADAQ6YHU6 1953 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 H0YJW9 148 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 M0R1X1 148 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 M0R296 226 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 HMGB3O15347 200 aaKnown RBP8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 CD5LO43866 347 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 GNG7O60262 68 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 FCGR2AP12318 317 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 IGLL1P15814 213 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 SRD5A2P31213 254 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 ARL16Q0P5N6 197 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 C7orf61Q8IZ16 206 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 FAM58AQ8N1B3 248 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 OR10G8Q8NGN5 311 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 C16orf52Q8NHV5 167 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 TAF15Q92804 592 aaKnown RBP eCLIP8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 NAT6Q93015 286 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 ZNF501Q96CX3 271 aaPredicted RBP8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 ZNF48Q96MX3 618 aaPredicted RBP8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 SFXN3Q9BWM7 321 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 IL36BQ9NZH7 164 aa8.55□□□□□ -1.04
PDGFRA-207ENST00000509092 KIAA1324LA8MWY0 1029 aaPredicted RBP8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 SNURFLB1AK76 121 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 GPR6P46095 362 aaPredicted RBP8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 GNB1P62873 340 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 CNN3Q15417 329 aaKnown RBP8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 KRTCAP3Q53RY4 240 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 BHLHA15Q7RTS1 189 aaPredicted RBP8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 TCEAL8Q8IYN2 117 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 CRIPAKQ8N1N5 446 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 C5orf17Q8NAS9 161 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 ZNF114Q8NC26 417 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 OR10V1Q8NGI7 309 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 KCNK17Q96T54 332 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 ATP6V0BQ99437 205 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 GNB1LQ9BYB4 327 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 CD207Q9UJ71 328 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 CCL26Q9Y258 94 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 PTPRSQ13332 1948 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 TRAV8-6A0A0B4J262 113 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 NPIPA5E9PKD4 350 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 NRG2O14511 850 aaPredicted RBP8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 TNFSF14O43557 240 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 UTS2O95399 124 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 SLC25A6P12236 298 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 HLA-DOBP13765 273 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 TIMP3P35625 211 aa8.54□□□□□ -1.04
PDGFRA-207ENST00000509092 IER3P46695 156 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms