RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 OTUB2Q96DC9 234 aa3.16□□□□□ -1.9
CHD1-205ENST00000508756 THTPAQ9BU02 230 aa3.16□□□□□ -1.9
CHD1-205ENST00000508756 PECRQ9BY49 303 aa3.16□□□□□ -1.9
CHD1-205ENST00000508756 GNB1LQ9BYB4 327 aa3.16□□□□□ -1.9
CHD1-205ENST00000508756 C9orf84Q5VXU9 1444 aa3.16□□□□□ -1.9
CHD1-205ENST00000508756 IGHV1-3A0A0C4DH29 117 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 HBZP02008 142 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 G0S2P27469 103 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 TGFBR2P37173 567 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 H2BFSP57053 126 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 JOSD1Q15040 202 aaPredicted RBP3.15□□□□□ -1.91
CHD1-205ENST00000508756 EBLN2Q6P2I7 272 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 TNFAIP8L2Q6P589 184 aaPredicted RBP3.15□□□□□ -1.91
CHD1-205ENST00000508756 FAM131AQ6UXB0 335 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 ADM2Q7Z4H4 148 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 OR4A5Q8NH83 315 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 MFSD8Q8NHS3 518 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 PRAP1Q96NZ9 151 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 C9orf16Q9BUW7 83 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 C11orf49Q9H6J7 331 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 LINC00574Q9H8X3 128 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 SLC2A9Q9NRM0 540 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 SLC22A13Q9Y226 551 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 PLXNB3Q9ULL4 1909 aa3.15□□□□□ -1.91
CHD1-205ENST00000508756 SCN4AP35499 1836 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 B4DEV8 164 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 C4orf51C9J302 202 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 DCTN3O75935 186 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 NSA2O95478 260 aaKnown RBP3.14□□□□□ -1.91
CHD1-205ENST00000508756 OR4A8P0C604 315 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 OR13C7P0DN81 318 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 CDK9P50750 372 aaKnown RBP3.14□□□□□ -1.91
CHD1-205ENST00000508756 GABARAPL2P60520 117 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 TMEM267Q0VDI3 215 aaPredicted RBP3.14□□□□□ -1.91
CHD1-205ENST00000508756 PAFAH1B3Q15102 231 aaKnown RBP3.14□□□□□ -1.91
CHD1-205ENST00000508756 Q6ZRU5 148 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 ASB17Q8WXJ9 295 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 SHANK2-AS3Q9BTD1 123 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 OR51B6Q9H340 312 aa3.14□□□□□ -1.91
CHD1-205ENST00000508756 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.14□□□□□ -1.91
CHD1-205ENST00000508756 A0A1W2PP64 1363 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 IGHV1-45A0A0A0MS14 117 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 ARGFXA6NJG6 315 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 TMEM250H0YL14 139 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 K7EPK0 472 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 CNIH1O95406 144 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 NRASP01111 189 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 HRASP01112 189 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 KRASP01116 189 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 LHBP01229 141 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 IL3P08700 152 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 OR5AC1P0C628 307 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 NTF3P20783 257 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 PSMB3P49720 205 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 SNAP25P60880 206 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 GLO1Q04760 184 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 SRSF6Q13247 344 aaKnown RBP3.13□□□□□ -1.91
CHD1-205ENST00000508756 PDK2Q15119 407 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 HIST2H3PS2Q5TEC6 136 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 LCN8Q6JVE9 175 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 SFXN4Q6P4A7 337 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 SCGB1D4Q6XE38 83 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 C16orf47Q6ZP98 133 aaPredicted RBP3.13□□□□□ -1.91
CHD1-205ENST00000508756 TMEM136Q6ZRR5 245 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 SLC51BQ86UW2 128 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 OR2V1Q8NHB1 315 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 DTD1Q8TEA8 209 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 TMBIM1Q969X1 311 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 TVP23CQ96ET8 276 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 TMEM216Q9P0N5 145 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 POLR1DQ9Y2S0 133 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 SVILO95425 2214 aa3.13□□□□□ -1.91
CHD1-205ENST00000508756 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 MRASO14807 208 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 TRGV3P03979 118 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 CTSEP14091 401 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 ELK4P28324 431 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 MAP2K4P45985 399 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 RAP1GDS1P52306 607 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 CTBP2P56545 445 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 NAA20P61599 178 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 VBP1P61758 197 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 DAD1P61803 113 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 BTN1A1Q13410 526 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 TAF1AQ15573 450 aaPredicted RBP3.12□□□□□ -1.91
CHD1-205ENST00000508756 TMEM215Q68D42 235 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 TMEM144Q7Z5S9 345 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 ZFP62Q8NB50 900 aaPredicted RBP3.12□□□□□ -1.91
CHD1-205ENST00000508756 ZNF680Q8NEM1 530 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 OR5B17Q8NGF7 314 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 OR2T4Q8NH00 348 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 OR5K1Q8NHB7 308 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 C16orf78Q8WTQ4 265 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 ACY3Q96HD9 319 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 TXNIPQ9H3M7 391 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 LINC00527Q9UJ94 153 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 OR51B4Q9Y5P0 310 aa3.12□□□□□ -1.91
CHD1-205ENST00000508756 SNAPC4Q5SXM2 1469 aa3.11□□□□□ -1.91
CHD1-205ENST00000508756 IZUMO1RA6ND01 250 aa3.11□□□□□ -1.91
CHD1-205ENST00000508756 SMIM9A6NGZ8 99 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms