RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 DCUN1D5Q9BTE7 237 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 SELENOIQ9C0D9 397 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 ETAA1Q9NY74 926 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 PEX16Q9Y5Y5 336 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 MCRIP1C9JLW8 97 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 HBZP02008 142 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 PF4P02776 101 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 MYL9P24844 172 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 RORCP51449 518 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 KRTAP10-11P60412 298 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 KHDC1LQ5JSQ8 128 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 FAM27D1Q5T7N8 215 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 C22orf42Q6IC83 251 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 SLC25A48Q6ZT89 311 aaKnown RBP12.78□□□□□ -0.36
LMNA-222ENST00000508500 CEACAM19Q7Z692 300 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 Q8N9W7 124 aa12.78□□□□□ -0.36
LMNA-222ENST00000508500 NXF2Q9GZY0 626 aaKnown RBP12.78□□□□□ -0.36
LMNA-222ENST00000508500 KMT2CQ8NEZ4 4911 aaKnown RBP12.77□□□□□ -0.37
LMNA-222ENST00000508500 A0A075B6Q4 140 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 UBE2QL1A1L167 161 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 SERPINE3A8MV23 424 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 ZNF137PP52743 207 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 RPL23AP62750 156 aaKnown RBP12.77□□□□□ -0.37
LMNA-222ENST00000508500 Q3ZCU0 254 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 SLC35E3Q7Z769 313 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 LRRTM1Q86UE6 522 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 MRPL41Q8IXM3 137 aaKnown RBP12.77□□□□□ -0.37
LMNA-222ENST00000508500 OR10V1Q8NGI7 309 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 CHPT1Q8WUD6 406 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 SLC25A46Q96AG3 418 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 SPACA1Q9HBV2 294 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 MBNL3Q9NUK0 354 aaKnown RBP12.77□□□□□ -0.37
LMNA-222ENST00000508500 TRAPPC2LQ9UL33 140 aa12.77□□□□□ -0.37
LMNA-222ENST00000508500 FAM90A10PA6NDY2 464 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 FAM90A7PA6NKC0 464 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 FAM90A23PA8MXZ1 464 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 K7EIL1 84 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 PDCD5O14737 125 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 CRTAPO75718 401 aaPredicted RBP12.76□□□□□ -0.37
LMNA-222ENST00000508500 CD1BP29016 333 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 RPS19P39019 145 aaKnown RBP12.76□□□□□ -0.37
LMNA-222ENST00000508500 RANBP1P43487 201 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 THBS3P49746 956 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 PSMD7P51665 324 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 OR10K2Q6IF99 312 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 OR2W3Q7Z3T1 314 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 TGIF2LXQ8IUE1 241 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 STPG2Q8N412 459 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 PRR18Q8N4B5 295 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 OR2T10Q8NGZ9 312 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 MRPL30Q8TCC3 161 aaKnown RBP12.76□□□□□ -0.37
LMNA-222ENST00000508500 AP3S1Q92572 193 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 FAM46BQ96A09 425 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 SLIRPQ9GZT3 109 aaKnown RBP12.76□□□□□ -0.37
LMNA-222ENST00000508500 ABCG5Q9H222 651 aa12.76□□□□□ -0.37
LMNA-222ENST00000508500 NCBP2LA6PVI3 153 aaKnown RBP12.75□□□□□ -0.37
LMNA-222ENST00000508500 FUT3P21217 361 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 SDC2P34741 201 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 GPR12P47775 334 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 F2RL1P55085 397 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 GNMTQ14749 295 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 MORN2Q502X0 79 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 HSD17B12Q53GQ0 312 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 C8orf86Q6ZUL3 223 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 ODF3L1Q8IXM7 274 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 NKAIN3Q8N8D7 197 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 OR52L2PQ8NGH6 319 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 KCTD12Q96CX2 325 aaKnown RBP12.75□□□□□ -0.37
LMNA-222ENST00000508500 RCC1LQ96I51 464 aaKnown RBP12.75□□□□□ -0.37
LMNA-222ENST00000508500 HSPB9Q9BQS6 159 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 UQCC2Q9BRT2 126 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 KCNK15Q9H427 330 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 TAF9BQ9HBM6 251 aa12.75□□□□□ -0.37
LMNA-222ENST00000508500 LIN7CQ9NUP9 197 aaKnown RBP12.75□□□□□ -0.37
LMNA-222ENST00000508500 SPINT2O43291 252 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 PDCD6O75340 191 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 CA11O75493 328 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 MPIG6BO95866 241 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 GLAP06280 429 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 VSIG8P0DPA2 414 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 CD37P11049 281 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 SRMP19623 302 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 CALRP27797 417 aaKnown RBP12.74□□□□□ -0.37
LMNA-222ENST00000508500 C1orf100Q5SVJ3 147 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 C6orf183Q5T699 404 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 FAM71E2Q8N5Q1 922 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 MCFD2Q8NI22 146 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 ACOT12Q8WYK0 555 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 S1PR3Q99500 378 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 P2RX4Q99571 388 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 SULT4A1Q9BR01 284 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 RNF167Q9H6Y7 350 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 GNG12Q9UBI6 72 aa12.74□□□□□ -0.37
LMNA-222ENST00000508500 WI2-2373I1.2A0A1W2PRP0 233 aa12.73□□□□□ -0.37
LMNA-222ENST00000508500 MOSP00540 346 aa12.73□□□□□ -0.37
LMNA-222ENST00000508500 IL3RAP26951 378 aa12.73□□□□□ -0.37
LMNA-222ENST00000508500 CHATP28329 748 aa12.73□□□□□ -0.37
LMNA-222ENST00000508500 HOXD3P31249 432 aaPredicted RBP12.73□□□□□ -0.37
LMNA-222ENST00000508500 TGFBR1P36897 503 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms