RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF562Q6V9R5 426 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 ZNF767PQ75MW2 155 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 PRR18Q8N4B5 295 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 OR2C3Q8N628 320 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 IQCF1Q8N6M8 205 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 UXS1Q8NBZ7 420 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 OR9Q2Q8NGE9 314 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 CNIH3Q8TBE1 160 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 USMG5Q96IX5 58 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 C7orf26Q96N11 449 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 CHRDL1Q9BU40 450 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 CHST5Q9GZS9 411 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 COA4Q9NYJ1 87 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 MLXQ9UH92 298 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 ING4Q9UNL4 249 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 R4GMQ9 66 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 RNF213Q63HN8 5207 aa5.26□□□□□ -1.57
VCAN-207ENST00000507162 DEFB131BA0A096LNP1 70 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 IGKV1-9A0A0C4DH69 117 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 C15orf65H3BRN8 121 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 EIF4EBP3O60516 100 aaPredicted RBP5.25□□□□□ -1.57
VCAN-207ENST00000507162 OR2C1O95371 312 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 T-ENOLP0DO92 83 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 TMEM225BP0DP42 221 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 ATF1P18846 271 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 ZNF137PP52743 207 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 ROM1Q03395 351 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 MICAQ29983 383 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 BTNL8Q6UX41 500 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 Q6ZSR3 168 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 CPOQ8IVL8 374 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 ZNF439Q8NDP4 499 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 MRPS24Q96EL2 167 aaKnown RBP5.25□□□□□ -1.57
VCAN-207ENST00000507162 GALNT14Q96FL9 552 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 YIPF3Q9GZM5 350 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 IL1RAPQ9NPH3 570 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 METTL1Q9UBP6 276 aaKnown RBP5.25□□□□□ -1.57
VCAN-207ENST00000507162 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 SNX5Q9Y5X3 404 aa5.25□□□□□ -1.57
VCAN-207ENST00000507162 PPP5D1E7EU14 171 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 H7C2Y5 167 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 SPINT2O43291 252 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 SRSF10O75494 262 aaKnown RBP5.24□□□□□ -1.57
VCAN-207ENST00000507162 RBMXL2O75526 392 aaKnown RBP5.24□□□□□ -1.57
VCAN-207ENST00000507162 APOL3O95236 402 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 APELAP0DMC3 54 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 CCL1P22362 96 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 ACTR3P61158 418 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 ATP5G2Q06055 141 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 FAM131AQ6UXB0 335 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 LYPD1Q8N2G4 141 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 BBS1Q8NFJ9 593 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 ASB17Q8WXJ9 295 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 MCUR1Q96AQ8 359 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 OPALINQ96PE5 141 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 BTBD10Q9BSF8 475 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 DPCDQ9BVM2 203 aaPredicted RBP5.24□□□□□ -1.57
VCAN-207ENST00000507162 SCRT1Q9BWW7 348 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 C6orf62Q9GZU0 229 aaPredicted RBP5.24□□□□□ -1.57
VCAN-207ENST00000507162 MOB1AQ9H8S9 216 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 FRRS1LQ9P0K9 344 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 AP3M1Q9Y2T2 418 aa5.24□□□□□ -1.57
VCAN-207ENST00000507162 TMEM30CPA0ZSE6 113 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 SLC22A1O15245 554 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 ORC5O43913 435 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 TUSC2O75896 110 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 SCGB1D2O95969 90 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 SMR3BP02814 79 aaPredicted RBP5.23□□□□□ -1.57
VCAN-207ENST00000507162 KCNJ3P48549 501 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 CXCR4P61073 352 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 PPP1R8Q12972 351 aaKnown RBP5.23□□□□□ -1.57
VCAN-207ENST00000507162 EXOSC2Q13868 293 aaKnown RBP5.23□□□□□ -1.57
VCAN-207ENST00000507162 PSG5Q15238 335 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 Q3ZCU0 254 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 TNFAIP8L3Q5GJ75 292 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 COQ5Q5HYK3 327 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 C6orf141Q5SZD1 244 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 GLYATQ6IB77 296 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 ZNF322Q6U7Q0 402 aaPredicted RBP5.23□□□□□ -1.57
VCAN-207ENST00000507162 GLDNQ6ZMI3 551 aaPredicted RBP5.23□□□□□ -1.57
VCAN-207ENST00000507162 ZNF367Q7RTV3 350 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 APRG1Q8IVJ8 170 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 SUMF2Q8NBJ7 301 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 AQP11Q8NBQ7 271 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 OR13C5Q8NGS8 318 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 OR1L1Q8NH94 360 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 TEX47Q8TBZ9 253 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 CD300LFQ8TDQ1 290 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 NEK7Q8TDX7 302 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 FGGYQ96C11 551 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 ADAT3Q96EY9 351 aaPredicted RBP5.23□□□□□ -1.57
VCAN-207ENST00000507162 KCTD14Q9BQ13 255 aaPredicted RBP5.23□□□□□ -1.57
VCAN-207ENST00000507162 HRH4Q9H3N8 390 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 RHOFQ9HBH0 211 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 OR2S2Q9NQN1 319 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 MAGEL2Q9UJ55 1249 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 TMEM14AQ9Y6G1 99 aa5.23□□□□□ -1.57
VCAN-207ENST00000507162 TRAV25A0A0B4J276 109 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 SCO2A0A1W2PP80 73 aa5.22□□□□□ -1.57
VCAN-207ENST00000507162 BBIP1A8MTZ0 92 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms