RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TMEM158Q8WZ71 300 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 RPEQ96AT9 228 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 NKX3-1Q99801 234 aaPredicted RBP6.87□□□□□ -1.31
PDGFC-205ENST00000506880 ABHD14AQ9BUJ0 271 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 IFT46Q9NQC8 304 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 ABCB10Q9NRK6 738 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 FAM212BQ9NTI7 297 aaPredicted RBP6.87□□□□□ -1.31
PDGFC-205ENST00000506880 NECAP2Q9NVZ3 263 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 ANXA10Q9UJ72 324 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 PSG11Q9UQ72 335 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 SVEP1Q4LDE5 3571 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 A0A0B4J203 849 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 TMEM235A6NFC5 223 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 OR5H14A6NHG9 310 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 A6NHS1 94 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 FAM90A9PA6NNJ1 464 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 FAM25AB3EWG3 89 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 FAM25CB3EWG5 89 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 FAM25GB3EWG6 89 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 RGS5O15539 181 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 HLA-DQB1P01920 261 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 TFF1P04155 84 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 FGF2P09038 288 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 GSTT2BP0CG30 244 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 FAM106CPP0CH98 169 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 RRASP10301 218 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 ELK1P19419 428 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 NFYBP25208 207 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 RAB13P51153 203 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 EBI3Q14213 229 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 TPTE2P1Q5T6R2 138 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 PRAMEF5Q5TYX0 476 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 DHRS11Q6UWP2 260 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 TMEM17Q86X19 198 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 IZUMO1Q8IYV9 350 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 CADM3Q8N126 398 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 ARRDC1Q8N5I2 433 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 SMIM4Q8WVI0 70 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 FCAMRQ8WWV6 532 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 ST6GALNAC6Q969X2 333 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 DIRAS2Q96HU8 199 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 SOSTQ9BQB4 213 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 AIFM2Q9BRQ8 373 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 GINS4Q9BRT9 223 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 KCNK15Q9H427 330 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 MTFP1Q9UDX5 166 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 VPREB3Q9UKI3 123 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 OR2W1Q9Y3N9 320 aa6.86□□□□□ -1.31
PDGFC-205ENST00000506880 DPPA5A6NC42 116 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 FGF16O43320 207 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 HPGDSO60760 199 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 B3GALNT1O75752 331 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 TUSC2O75896 110 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 NDUFA7O95182 113 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 EIF4EP06730 217 aaKnown RBP6.85□□□□□ -1.31
PDGFC-205ENST00000506880 CSF1P09603 554 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 S100GP29377 79 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 FAUP35544 74 aaKnown RBP6.85□□□□□ -1.31
PDGFC-205ENST00000506880 TGFBR1P36897 503 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 ZNF45Q02386 682 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 BAMBIQ13145 260 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 MEF2DQ14814 521 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 CDK10Q15131 360 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 CNPY1Q3B7I2 92 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 VAX1Q5SQQ9 334 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 DHRS7BQ6IAN0 325 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-205ENST00000506880 C16orf87Q6PH81 154 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 BRICD5Q6PL45 260 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 ZNF782Q6ZMW2 699 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-205ENST00000506880 ZNF833PQ6ZTB9 187 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 OVCH2Q7RTZ1 564 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 H1FOOQ8IZA3 346 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-205ENST00000506880 CCDC107Q8WV48 283 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 S100ZQ8WXG8 99 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 GCDHQ92947 438 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-205ENST00000506880 TOMM40LQ969M1 308 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 AGMATQ9BSE5 352 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 C6orf62Q9GZU0 229 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-205ENST00000506880 C1RLQ9NZP8 487 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 ZNF581Q9P0T4 197 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 EXTL2Q9UBQ6 330 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 ZNF221Q9UK13 617 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 ZNF580Q9UK33 172 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 RBMX2Q9Y388 322 aaKnown RBP6.85□□□□□ -1.31
PDGFC-205ENST00000506880 MMP24Q9Y5R2 645 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 COL6A5A8TX70 2615 aa6.85□□□□□ -1.31
PDGFC-205ENST00000506880 ANK3Q12955 4377 aaKnown RBP6.85□□□□□ -1.31
PDGFC-205ENST00000506880 A0A0U1RQK1 487 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 SMIM30A4D0T7 59 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 HSD17B6O14756 317 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 MMP23AO75900 390 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 CRYBA1P05813 215 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 COX7A1P24310 79 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 RBMXP38159 391 aaKnown RBP6.84□□□□□ -1.31
PDGFC-205ENST00000506880 CEACAM6P40199 344 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 KIR2DS2P43631 304 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 OR3A3P47888 321 aa6.84□□□□□ -1.31
PDGFC-205ENST00000506880 COMPP49747 757 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-205ENST00000506880 LUMP51884 338 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-205ENST00000506880 UCP3P55916 312 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms