RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ITGB1BP1O14713 200 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 HS3ST1O14792 307 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 GALR2O43603 387 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-208ENST00000506368 JMJD7P0C870 316 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 ARL4DP49703 201 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 C21orf62-AS1Q17RA5 79 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 TPTE2P1Q5T6R2 138 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 TOMM20LQ6UXN7 152 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 DTX1Q86Y01 620 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 RPP25LQ8N5L8 163 aaKnown RBP13.57□□□□□ -0.24
SCLT1-208ENST00000506368 OR4F5Q8NH21 305 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 OR4F4Q96R69 305 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 MSL2Q9HCI7 577 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 CCL28Q9NRJ3 127 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 AURKAIP1Q9NWT8 199 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-208ENST00000506368 ZNF581Q9P0T4 197 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 A0A0U1RQK1 487 aa13.56□□□□□ -0.24
SCLT1-208ENST00000506368 ZNF320A2RRD8 509 aa13.56□□□□□ -0.24
SCLT1-208ENST00000506368 ZNF814B7Z6K7 855 aa13.56□□□□□ -0.24
SCLT1-208ENST00000506368 IGHV4-34P06331 123 aa13.56□□□□□ -0.24
SCLT1-208ENST00000506368 DMRTA1Q5VZB9 504 aa13.56□□□□□ -0.24
SCLT1-208ENST00000506368 OR2M3Q8NG83 312 aa13.56□□□□□ -0.24
SCLT1-208ENST00000506368 RASL10BQ96S79 203 aa13.56□□□□□ -0.24
SCLT1-208ENST00000506368 TMEM9BQ9NQ34 198 aa13.56□□□□□ -0.24
SCLT1-208ENST00000506368 R4GN57 208 aa13.56□□□□□ -0.24
SCLT1-208ENST00000506368 TRBV6-6A0A0A6YYG2 114 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 ZNF816-ZNF321PA0A0X1KG74 233 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 SHISA8B8ZZ34 492 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 H3BP45 60 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 SIAH2O43255 324 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 LILRA1O75019 489 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 KRTAP27-1Q3LI81 207 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 FAM78BQ5VT40 261 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 BRICD5Q6PL45 260 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-208ENST00000506368 C17orf82Q86X59 251 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-208ENST00000506368 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 KLHDC7BQ96G42 594 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 SDSLQ96GA7 329 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 CCDC163A0A0D9SF12 145 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 F6UZH7 168 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 SYNGR3O43761 229 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 COX5AP20674 150 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 TCF15Q12870 199 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 OR5I1Q13606 314 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 LPAL2Q16609 132 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 NFAM1Q8NET5 270 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-208ENST00000506368 OR1F12Q8NHA8 337 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 OR4C12Q96R67 309 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 DIRC2Q96SL1 478 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 METTL7AQ9H8H3 244 aa13.55□□□□□ -0.24
SCLT1-208ENST00000506368 RYDENQ9NUL5 291 aaKnown RBP13.55□□□□□ -0.24
SCLT1-208ENST00000506368 MUC6Q6W4X9 2439 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 IGKV1D-13A0A0B4J2D9 117 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 A6NNC1 897 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 KRASP01116 189 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 IGLV3-19P01714 112 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 IGKV1-13P0DP09 117 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 PTGDSP41222 190 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 RTP5Q14D33 572 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 ORAOV1Q8WV07 137 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 OR5P3Q8WZ94 311 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 SLC35E1Q96K37 410 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 OR2W1Q9Y3N9 320 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 SPEGQ15772 3267 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 hCG_38984A0A1B0GV85 526 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 NPIPA2E9PIF3 369 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 NPIPA3F8WFD2 350 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 SLC38A11Q08AI6 406 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 ARL16Q0P5N6 197 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 LINC01551Q86U37 167 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 HAPLN4Q86UW8 402 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 FADS6Q8N9I5 356 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 OR1L3Q8NH93 324 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 RBM24Q9BX46 236 aaKnown RBP13.54□□□□□ -0.24
SCLT1-208ENST00000506368 ULBP2Q9BZM5 246 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 ELOVL5Q9NYP7 299 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 WIPI2Q9Y4P8 454 aa13.54□□□□□ -0.24
SCLT1-208ENST00000506368 TRAV39A0A0B4J263 110 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 A0A0G2JRQ6 117 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 NPIPB11E5RHQ5 1161 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 SLC33A1O00400 549 aaPredicted RBP13.53□□□□□ -0.24
SCLT1-208ENST00000506368 RAB7AP51149 207 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 FGF12P61328 243 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 TESK1Q15569 626 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 TRIM61Q5EBN2 209 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 PLCXD3Q63HM9 321 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 TMEM14EPQ6UXP3 125 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 TMEM256Q8N2U0 113 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 ZNF611Q8N823 705 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 OR5AU1Q8NGC0 362 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 TMEM147Q9BVK8 224 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 WNT5BQ9H1J7 359 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 CACNG5Q9UF02 275 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 KNL1Q8NG31 2342 aa13.53□□□□□ -0.24
SCLT1-208ENST00000506368 TNFSF11O14788 317 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 NXPH3O95157 252 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 SCTP09683 121 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms