RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 IFI27L2Q9H2X8 130 aa13.15□□□□□ -0.3
PDLIM7-215ENST00000506161 ISYNA1Q9NPH2 558 aa13.15□□□□□ -0.3
PDLIM7-215ENST00000506161 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
PDLIM7-215ENST00000506161 SLC17A2O00624 439 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 LANCL1O43813 399 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 BPNT1O95861 308 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 MOSP00540 346 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 UBBP0CG47 229 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 CD33P20138 364 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 BLVRBP30043 206 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 OR10A3P58181 314 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 RPL23AP62750 156 aaKnown RBP13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 CFHR3Q02985 330 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 VAX1Q5SQQ9 334 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 OR2W3Q7Z3T1 314 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 OR51D1Q8NGF3 324 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 OR6M1Q8NGM8 313 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 KCNG3Q8TAE7 436 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 MRAPQ8TCY5 172 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 NEDD4LQ96PU5 975 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 NABP2Q9BQ15 211 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 ABHD14AQ9BUJ0 271 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 LIN7CQ9NUP9 197 aaKnown RBP13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 OR1A1Q9P1Q5 309 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 JPT1Q9UK76 154 aa13.14□□□□□ -0.31
PDLIM7-215ENST00000506161 SAA2-SAA4A0A096LPE2 208 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 LDLRAD4O15165 306 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 ST8SIA5O15466 376 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 YPEL1O60688 119 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 PF4P02776 101 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 RPLP1P05386 114 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 SAA2P0DJI9 122 aaPredicted RBP13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 IL3RAP26951 378 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 CALRP27797 417 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 HTD2P86397 168 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 PLAC9Q5JTB6 97 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 TRAT1Q6PIZ9 186 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 MRPL41Q8IXM3 137 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 FAM89BQ8N5H3 189 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 CHPT1Q8WUD6 406 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 YPEL2Q96QA6 119 aa13.13□□□□□ -0.31
PDLIM7-215ENST00000506161 A0A0B4J203 849 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 IGKV1-6A0A0C4DH72 117 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 PROP1O75360 226 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 SLC2A2P11168 524 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 THBS3P49746 956 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 LINC00205P59089 165 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 TMEM30BQ3MIR4 351 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 MOGAT2Q3SYC2 334 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 RPL39P5Q59GN2 51 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 HES5Q5TA89 166 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 ZNF833PQ6ZTB9 187 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 ZNF554Q86TJ5 538 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 NR2C2APQ86WQ0 139 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 KCNIP1Q9NZI2 227 aa13.12□□□□□ -0.31
PDLIM7-215ENST00000506161 TMEM272A0A1B0GTI8 110 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 SCTP09683 121 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 HOXD3P31249 432 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 VEGFCP49767 419 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 TBCEQ15813 527 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 DEFB136Q30KP8 78 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 STEAP3Q658P3 488 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 GLDNQ6ZMI3 551 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 SETD6Q8TBK2 473 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 IL1F10Q8WWZ1 152 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 GALMQ96C23 342 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 ARHGAP5-AS1Q96IT6 56 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 ABHD14BQ96IU4 210 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 PECRQ9BY49 303 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 ACOT13Q9NPJ3 140 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 NECAP2Q9NVZ3 263 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 ZNF107Q9UII5 783 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 KCNK7Q9Y2U2 307 aa13.11□□□□□ -0.31
PDLIM7-215ENST00000506161 K7EIL1 84 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 ARSBP15848 533 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 ACTBP60709 375 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 NDPQ00604 133 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 C2orf76Q3KRA6 126 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 KLHL30-AS1Q8NEE0 82 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 FAM3DQ96BQ1 224 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 RAX2Q96IS3 184 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 P2RX4Q99571 388 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 AGMATQ9BSE5 352 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 PLEKHJ1Q9NW61 149 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 FBXO7Q9Y3I1 522 aa13.1□□□□□ -0.31
PDLIM7-215ENST00000506161 TRBV6-6A0A0A6YYG2 114 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 WI2-2373I1.2A0A1W2PRP0 233 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 SMIM30A4D0T7 59 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 AP4M1O00189 453 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 TXNL1O43396 289 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 ATP6V1G2O95670 118 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 CD3GP09693 182 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 CT45A6P0DMU7 189 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 CT45A5P0DMU8 189 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 CT45A7P0DMV0 189 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 HLA-DRB3P79483 266 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 MMDQ15546 238 aa13.09□□□□□ -0.31
PDLIM7-215ENST00000506161 RAB11BQ15907 218 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms