RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 IGHA1P01876 353 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 TTRP02766 147 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 P0C879 139 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 SLC2A2P11168 524 aaPredicted RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF19P17023 458 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 CCL1P22362 96 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 PRKACBP22694 351 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 MAPK3P27361 379 aaPredicted RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 DCKP27707 260 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 EPHA2P29317 976 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 BLVRBP30043 206 aaPredicted RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 CHRNA7P36544 502 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 CAPGP40121 348 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 VHLP40337 213 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 RBP2P50120 134 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 ATP1B3P54709 279 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 ERVK11-1P61568 191 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 DLK1P80370 383 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF816Q0VGE8 651 aaPredicted RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 GUCA2BQ16661 112 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 C12orf74Q32Q52 190 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 CEACAM21Q3KPI0 293 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 TM4SF20Q53R12 229 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 LPCAT4Q643R3 524 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 CDPF1Q6NVV7 123 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 Q6ZRN7 208 aaPredicted RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 MOB3CQ70IA8 216 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 AHSA2Q719I0 299 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 SSX6Q7RTT6 188 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 BCDIN3DQ7Z5W3 292 aaKnown RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 KCTD20Q7Z5Y7 419 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 NR2C2APQ86WQ0 139 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 ENTHD1Q8IYW4 607 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 ELMOD2Q8IZ81 293 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 SYS1Q8N2H4 156 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 STX19Q8N4C7 294 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 DHRSXQ8N5I4 330 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 ASCC1Q8N9N2 400 aaKnown RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 OR13C9Q8NGT0 318 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 OR11H2Q8NH07 326 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF671Q8TAW3 534 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 ZNRF4Q8WWF5 429 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 EMG1Q92979 244 aaKnown RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 SGK3Q96BR1 496 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 LGALS12Q96DT0 336 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 SMIM19Q96E16 107 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 KIRREL1Q96J84 757 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 CEP19Q96LK0 163 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 OPALINQ96PE5 141 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 MBOAT4Q96T53 435 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 GPER1Q99527 375 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 S100A13Q99584 98 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 MND1Q9BWT6 205 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 PKIBQ9C010 78 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 Q9H521 79 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 RANGRFQ9HD47 186 aaPredicted RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 OR14J1Q9UGF5 321 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 CELA1Q9UNI1 258 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 SLC22A13Q9Y226 551 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 FOXA2Q9Y261 457 aaPredicted RBP2.37□□□□□ -2.03
TCOF1-208ENST00000506063 NUBP2Q9Y5Y2 271 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 SELENOKQ9Y6D0 94 aa2.37□□□□□ -2.03
TCOF1-208ENST00000506063 TRBV2A0A0J9YWF9 115 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 FUOMA2VDF0 154 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 F8VVB4 439 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 F8VWA3 439 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 J3QR06 171 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 CASQ2O14958 399 aaPredicted RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 SULT1B1O43704 296 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 IFNA21P01568 189 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 IFNA17P01571 189 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 HLA-DRB1P01911 266 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 PLA2G1BP04054 148 aaKnown RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 CGB3P0DN86 165 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 CGB7P0DN87 165 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF44P15621 663 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 PRKACAP17612 351 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 RAB3AP20336 220 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 GABRR1P24046 479 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 POLR2IP36954 125 aaKnown RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 RANBP1P43487 201 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 RAB7AP51149 207 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 CCR9P51686 369 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 FUT6P51993 359 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 HCCSP53701 268 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 AQP4P55087 323 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 MTCP1P56278 107 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF85Q03923 595 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 IL24Q13007 206 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 RIPK1Q13546 671 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 ALKBH1Q13686 389 aaKnown RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 RBM39Q14498 530 aaKnown RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 EDDM3AQ14507 147 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 ODF1Q14990 250 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 CDK5R1Q15078 307 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 C17orf58Q2M2W7 97 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 ODF3L2Q3SX64 289 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 CCDC58Q4VC31 144 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 SPIN3Q5JUX0 258 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 SLC25A30Q5SVS4 291 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms