RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 Q3ZCU0 254 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 SP5Q6BEB4 398 aaPredicted RBP9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 LYPD2Q6UXB3 125 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 LIAT1Q6ZQX7 453 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 TBC1D26Q86UD7 250 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 LDLRAD3Q86YD5 345 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 TCTEX1D1Q8N7M0 179 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 DCTN5Q9BTE1 182 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 CHIAQ9BZP6 476 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 PLEKHF2Q9H8W4 249 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 GFOD1Q9NXC2 390 aa9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 USP9XQ93008 2570 aaPredicted RBP9.96□□□□□ -0.82
POLR2J3-211ENST00000506060 DOCK11Q5JSL3 2073 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 C13orf42A0A1B0GVH6 325 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 A0A1B0GW55 424 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DBX1A6NMT0 343 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 H0Y980 276 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 OVOL3O00110 214 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 PGLYRP1O75594 196 aaPredicted RBP9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 ATG12O94817 140 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 SERPINE2P07093 398 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 OR5AC1P0C628 307 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DUX4L2P0CJ85 424 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DUX4L3P0CJ86 424 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DUX4L4P0CJ87 422 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DUX4L5P0CJ88 424 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DUX4L6P0CJ89 424 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DUX4L7P0CJ90 424 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 C4BPBP20851 252 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DNASE1P24855 282 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 F2RP25116 425 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 SRSF4Q08170 494 aaKnown RBP9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 TMEM187Q14656 261 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 LTC4SQ16873 150 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 C17orf58Q2M2W7 97 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 MORN2Q502X0 79 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 AVPI1Q5T686 147 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DUX4L9Q6RFH8 374 aaPredicted RBP9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 HEPN1Q6WQI6 88 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 C5orf24Q7Z6I8 188 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 ZNF695Q8IW36 515 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 LRTM2Q8N967 370 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 IL22RA2Q969J5 263 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 HSD17B10Q99714 261 aaKnown RBP9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 TMEM222Q9H0R3 208 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 OR2D2Q9H210 308 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 DUX4Q9UBX2 424 aa9.95□□□□□ -0.82
POLR2J3-211ENST00000506060 IGHV3-43A0A0B4J1X8 118 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 RNF224P0DH78 156 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 IGHV3-43DP0DP04 118 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 RPA2P15927 270 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 NFYBP25208 207 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 GPR12P47775 334 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 GZMKP49863 264 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 PDLIM4P50479 330 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 GNMTQ14749 295 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 ANKRD55Q3KP44 614 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 TMEM200BQ69YZ2 307 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 ZNF66Q6ZN08 573 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 DRAM1Q8N682 238 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 SPIN2AQ99865 258 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 SPIN2BQ9BPZ2 258 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 NMES1Q9C002 83 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 PATZ1Q9HBE1 687 aaKnown RBP9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 C19orf12Q9NSK7 152 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 FAM212BQ9NTI7 297 aaPredicted RBP9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 ZFP57Q9NU63 452 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 CTSZQ9UBR2 303 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 RPUSD1Q9UJJ7 312 aaKnown RBP9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 PSG11Q9UQ72 335 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 GAB2Q9UQC2 676 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 TMED3Q9Y3Q3 217 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 USF3Q68DE3 2245 aa9.94□□□□□ -0.82
POLR2J3-211ENST00000506060 FLNCQ14315 2725 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 CLEC18AA5D8T8 446 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 SIX6O95475 246 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 RBP4P02753 201 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 HOXB5P09067 269 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 PET100P0DJ07 73 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 UCP1P25874 307 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 H2BFSP57053 126 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 LOXL3P58215 753 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 GNB2P62879 340 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 ESCO2Q56NI9 601 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 CLEC18CQ8NCF0 446 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 CD300LFQ8TDQ1 290 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 GLYATL2Q8WU03 294 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 C2orf50Q96LR7 162 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 ABHD14AQ9BUJ0 271 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 PIPOXQ9P0Z9 390 aa9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 YLPM1P49750 1951 aaKnown RBP9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 KMT2BQ9UMN6 2715 aaPredicted RBP9.93□□□□□ -0.82
POLR2J3-211ENST00000506060 NDUFS8O00217 210 aa9.92□□□□□ -0.82
POLR2J3-211ENST00000506060 RAB29O14966 203 aa9.92□□□□□ -0.82
POLR2J3-211ENST00000506060 LY6HO94772 140 aa9.92□□□□□ -0.82
POLR2J3-211ENST00000506060 PLA2G2AP14555 144 aa9.92□□□□□ -0.82
POLR2J3-211ENST00000506060 ZNF16P17020 682 aaPredicted RBP9.92□□□□□ -0.82
POLR2J3-211ENST00000506060 KIR2DS2P43631 304 aa9.92□□□□□ -0.82
POLR2J3-211ENST00000506060 SRSF1Q07955 248 aaKnown RBP eCLIP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms