RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TAMM41Q96BW9 452 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 C19orf60Q96EN9 201 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 TMEM216Q9P0N5 145 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 FBXL3Q9UKT7 428 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 DSCAML1Q8TD84 2053 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 USP42Q9H9J4 1324 aaKnown RBP1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 FAM25EA8MYX2 175 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 C9J4A7 227 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 UGT2B11O75310 529 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 ESDP10768 282 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 SLC25A16P16260 332 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 ACTBP60709 375 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 ACTG1P63261 375 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 FAM3AP98173 230 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 RASL11AQ6T310 242 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 OR5K1Q8NHB7 308 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 DCANP1Q8TF63 244 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 C16orf78Q8WTQ4 265 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 CCDC12Q8WUD4 166 aaPredicted RBP1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 PPWD1Q96BP3 646 aaKnown RBP1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 CFAP53Q96M91 514 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 MGLLQ99685 303 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 C1QTNF6Q9BXI9 259 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 DNAJC12Q9UKB3 198 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 CLUHO75153 1309 aa1.35□□□□□ -2.19
TOPBP1-204ENST00000505804 EIF4G1Q04637 1599 aaKnown RBP1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 IGHV3-73A0A0B4J1V6 119 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 A0A0G2JQZ4 141 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 LINC00862A6NCI5 91 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 ZNF860A6NHJ4 632 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 MPZL2O60487 215 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 ASS1P00966 412 aaKnown RBP1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 ADORA1P30542 326 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 CD200P41217 278 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 HADHBP55084 474 aaKnown RBP1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 RAB8AP61006 207 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 TMED1Q13445 227 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 SYCP1Q15431 976 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 DYNC2LI1Q8TCX1 351 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 TMBIM1Q969X1 311 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 MBOAT7Q96N66 472 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 MND1Q9BWT6 205 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 UGT2B28Q9BY64 529 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 C11orf1Q9H5F2 150 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 TXNL4BQ9NX01 149 aaKnown RBP1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 LINC00527Q9UJ94 153 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 ALG5Q9Y673 324 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 COL4A1P02462 1669 aa1.34□□□□□ -2.19
TOPBP1-204ENST00000505804 DOCK10Q96BY6 2186 aa1.34□□□□□ -2.2
TOPBP1-204ENST00000505804 PXDNLA1KZ92 1463 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 CD36P16671 472 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 ALOX5APP20292 161 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 SYT1P21579 422 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 C1DQ13901 141 aaKnown RBP1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 ZNF625Q96I27 306 aaPredicted RBP1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 GPR22Q99680 433 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 ZNF426Q9BUY5 554 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 PECRQ9BY49 303 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 ASCL3Q9NQ33 180 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 SNX12Q9UMY4 172 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 PSMD13Q9UNM6 376 aa1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 NYNRINQ9P2P1 1898 aaKnown RBP1.33□□□□□ -2.2
TOPBP1-204ENST00000505804 PLCH2O75038 1416 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 DHRS12A0PJE2 317 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 LIN7AO14910 233 aaPredicted RBP1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 OR13C7P0DN81 318 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 CDK2P24941 298 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 CASQ1P31415 396 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 DLX6P56179 175 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 TSPEAR-AS2P59090 65 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 FGF12P61328 243 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 RBM48Q5RL73 367 aaKnown RBP1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 SPERTQ8NA61 448 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 TNFAIP8L1Q8WVP5 186 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 TRNT1Q96Q11 434 aaKnown RBP1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 TBX5Q99593 518 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 CDCA4Q9BXL8 241 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 MED28Q9H204 178 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 AMMECR1Q9Y4X0 333 aaPredicted RBP1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 CR1P17927 2039 aa1.32□□□□□ -2.2
TOPBP1-204ENST00000505804 KDM5BQ9UGL1 1544 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 F5H5K5 113 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 UBFD1O14562 309 aaKnown RBP1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 YKT6O15498 198 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 ZW10O43264 779 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 SYNGR1O43759 233 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 PVALBP20472 110 aaPredicted RBP1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 CRHBPP24387 322 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 ATP6V0CP27449 155 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 HINT1P49773 126 aaPredicted RBP1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 LINC00313P59037 77 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 USF2Q15853 346 aaPredicted RBP1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 TPRXLQ17RH7 258 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 C2orf91Q6ZV80 131 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 SELENOHQ8IZQ5 122 aaKnown RBP1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 C17orf78Q8N4C9 275 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 OTUD6BQ8N6M0 293 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 NATD1Q8N6N6 113 aa1.31□□□□□ -2.2
TOPBP1-204ENST00000505804 CCDC112Q8NEF3 446 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms