RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TMEM86BQ8N661 226 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 ZDHHC22Q8N966 263 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 OR10V1Q8NGI7 309 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 CT45A3Q8NHU0 189 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 MCFD2Q8NI22 146 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 DCUN1D5Q9BTE7 237 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 CABLES2Q9BTV7 478 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 ST6GALNAC5Q9BVH7 336 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 TOLLIPQ9H0E2 274 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 MMP27Q9H306 513 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 ESM1Q9NQ30 184 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 EXTL2Q9UBQ6 330 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 A3GALT2U3KPV4 340 aa9.63□□□□□ -0.87
PDLIM5-208ENST00000504489 IGKV1D-8A0A087WSZ0 117 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 IGKV1-6A0A0C4DH72 117 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 A0A1W2PPE3 182 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 VGLL3A8MV65 326 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 OOSP1A8MZH6 123 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 HSPA12AO43301 675 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 VENTXO95231 258 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 PTHLHP12272 177 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 PRSS3P35030 304 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 PPP1CCP36873 323 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 IER3P46695 156 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 ZNF134P52741 427 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 MADCAM1Q13477 382 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 HERPUD1Q15011 391 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 SSX2Q16385 188 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 FOXB2Q5VYV0 432 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 HOGA1Q86XE5 327 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 OR10X1Q8NGY0 326 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 C15orf40Q8WUR7 153 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 SSMEM1Q8WWF3 244 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 MAFIPQ8WZ33 124 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 C6orf62Q9GZU0 229 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 DPAGT1Q9H3H5 408 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 SCPEP1Q9HB40 452 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 SLC23A1Q9UHI7 598 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 MRPS7Q9Y2R9 242 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 POMT1Q9Y6A1 747 aa9.62□□□□□ -0.87
PDLIM5-208ENST00000504489 TRBV6-7A0A0A0MS04 114 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 A6NHS1 94 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 SULT1C2O00338 296 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 SLC31A2O15432 143 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 HOXA3O43365 443 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 CTXN2P0C2S0 81 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 IL3RAP26951 378 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 CEACAM6P40199 344 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 DYNLT3P51808 116 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 ZNF137PP52743 207 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 SLC9A3R2Q15599 337 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 LRRC75BQ2VPJ9 315 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 IGSF11Q5DX21 431 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 TPTE2P1Q5T6R2 138 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 CCDC144NLQ6NUI1 221 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 CNIH2Q6PI25 160 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 GVQW1Q8N7I0 195 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 BEST4Q8NFU0 473 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 OR10J5Q8NHC4 309 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 GPX8Q8TED1 209 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 EDARADDQ8WWZ3 215 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 ST6GALNAC6Q969X2 333 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 SSX3Q99909 188 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 ABHD14AQ9BUJ0 271 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 OR1A1Q9P1Q5 309 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 RABL2AQ9UBK7 228 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 ANXA10Q9UJ72 324 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 ANAPC10Q9UM13 185 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 RABL2BQ9UNT1 228 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 HILPDAQ9Y5L2 63 aa9.61□□□□□ -0.87
PDLIM5-208ENST00000504489 ATRQ13535 2644 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 TRIM77I1YAP6 450 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 BET1O15155 118 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 IGHV4-59P01825 116 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 LPLP06858 475 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 NAT1P18440 290 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 PAX6P26367 422 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 TNFSF8P32971 234 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 RAB7AP51149 207 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 ARHGDIBP52566 201 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 UBA52P62987 128 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 ZNF816Q0VGE8 651 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 SNX29P2Q8IUI4 249 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 OR8H3Q8N146 312 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 OR2AK2Q8NG84 335 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 OR5R1Q8NH85 324 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 PIFOQ8TCI5 191 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 ZFAND2BQ8WV99 257 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 TOMM40LQ969M1 308 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 RPEQ96AT9 228 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 DIRAS2Q96HU8 199 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 ABHD1Q96SE0 405 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 GHITMQ9H3K2 345 aa9.6□□□□□ -0.87
PDLIM5-208ENST00000504489 MEIS3P1A6NDR6 274 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 BTBD17A6NE02 478 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 H3BUX3 64 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 GAPDHP04406 335 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 RNASE1P07998 156 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 ODF3L1Q8IXM7 274 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms