RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 CLEC7AQ9BXN2 247 aa12.47□□□□□ -0.41
DDR1-250ENST00000503628 NAA50Q9GZZ1 169 aaKnown RBP12.47□□□□□ -0.41
DDR1-250ENST00000503628 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
DDR1-250ENST00000503628 LINC00574Q9H8X3 128 aa12.47□□□□□ -0.41
DDR1-250ENST00000503628 CALYQ9NYX4 217 aa12.47□□□□□ -0.41
DDR1-250ENST00000503628 KIAA2026Q5HYC2 2103 aa12.47□□□□□ -0.41
DDR1-250ENST00000503628 DNAH1Q9P2D7 4330 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 TMEM127O75204 238 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 GABARAPO95166 117 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 SNRPBP14678 240 aaKnown RBP12.46□□□□□ -0.41
DDR1-250ENST00000503628 GZMHP20718 246 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 RPS19P39019 145 aaKnown RBP12.46□□□□□ -0.41
DDR1-250ENST00000503628 SERPINB10P48595 397 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 LUMP51884 338 aaPredicted RBP12.46□□□□□ -0.41
DDR1-250ENST00000503628 VBP1P61758 197 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 IDNKQ5T6J7 187 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 OR52W1Q6IF63 320 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 CROCCP3Q8IVE0 287 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 KLHL30-AS1Q8NEE0 82 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 OR4K15Q8NH41 348 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 LGALS14Q8TCE9 139 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 CCDC107Q8WV48 283 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 DPM3Q9P2X0 92 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 TRAPPC2LQ9UL33 140 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 HSF4Q9ULV5 492 aa12.46□□□□□ -0.41
DDR1-250ENST00000503628 LYSTQ99698 3801 aa12.46□□□□□ -0.42
DDR1-250ENST00000503628 METTL21EPA6NDL7 271 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 NPIPB11E5RHQ5 1161 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 SNRNP70P08621 437 aaKnown RBP12.45□□□□□ -0.42
DDR1-250ENST00000503628 LYL1P12980 280 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 SSTR5P35346 364 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 GDNFP39905 211 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 RPL5P46777 297 aaKnown RBP12.45□□□□□ -0.42
DDR1-250ENST00000503628 TMEM50BP56557 158 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 SCAND1P57086 179 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 RAB25P57735 213 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 CTF1Q16619 201 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 C6orf183Q5T699 404 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 RTN4RL2Q86UN3 420 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 MRPL30Q8TCC3 161 aaKnown RBP12.45□□□□□ -0.42
DDR1-250ENST00000503628 ARHGAP5-AS1Q96IT6 56 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 PECRQ9BY49 303 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 ZFP57Q9NU63 452 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 IDI2-AS1Q9NZ38 188 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 SCOCQ9UIL1 159 aa12.45□□□□□ -0.42
DDR1-250ENST00000503628 C15orf65H3BRN8 121 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 ORC5O43913 435 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 SLC6A1P30531 599 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 ECI1P42126 302 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 MOGAT2Q3SYC2 334 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 PLAC9Q5JTB6 97 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 TRAT1Q6PIZ9 186 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 BAIAP2L2Q6UXY1 529 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 ABHD12Q8N2K0 398 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 OR10A7Q8NGE5 316 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 OR10R2Q8NGX6 335 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 RFESDQ8TAC1 157 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 ARL11Q969Q4 196 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 SLC25A46Q96AG3 418 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 RAB3CQ96E17 227 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 KIRREL1Q96J84 757 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 NOL4LQ96MY1 436 aaPredicted RBP12.44□□□□□ -0.42
DDR1-250ENST00000503628 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 MBNL3Q9NUK0 354 aaKnown RBP12.44□□□□□ -0.42
DDR1-250ENST00000503628 AK3Q9UIJ7 227 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 ETV7Q9Y603 341 aa12.44□□□□□ -0.42
DDR1-250ENST00000503628 A0A087X0M5 115 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 A0A1B0GX30 115 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 M0QZK8 103 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 RAB27BO00194 218 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 NAPSAO96009 420 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 RCC1P18754 421 aaPredicted RBP12.43□□□□□ -0.42
DDR1-250ENST00000503628 NFYBP25208 207 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 CD34P28906 385 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 RAX2Q96IS3 184 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 RCHY1Q96PM5 261 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 KRTAP17-1Q9BYP8 105 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 RIMS4Q9H426 269 aaPredicted RBP12.43□□□□□ -0.42
DDR1-250ENST00000503628 CHMP1AQ9HD42 196 aaPredicted RBP12.43□□□□□ -0.42
DDR1-250ENST00000503628 RAB9BQ9NP90 201 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 ABRACLQ9P1F3 81 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 SPATA2Q9UM82 520 aa12.43□□□□□ -0.42
DDR1-250ENST00000503628 FAM172BPA6NC97 362 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 LEUTXA8MZ59 168 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 C12orf77C9JDV5 145 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 CCL24O00175 119 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 SPINT2O43291 252 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 ARHGDIBP52566 201 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 LTC4SQ16873 150 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 ZNF554Q86TJ5 538 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 CLVS1Q8IUQ0 354 aaPredicted RBP12.42□□□□□ -0.42
DDR1-250ENST00000503628 ZNF695Q8IW36 515 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 OR5H6Q8NGV6 325 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 CHPT1Q8WUD6 406 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 ZNF286AQ9HBT8 521 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 PALMDQ9NP74 551 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 RHBDL2Q9NX52 303 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 KCNIP1Q9NZI2 227 aa12.42□□□□□ -0.42
DDR1-250ENST00000503628 LINC00527Q9UJ94 153 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms