RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 NICN1Q9BSH3 213 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 ANKRD60Q9BZ19 345 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 LIN7CQ9NUP9 197 aaKnown RBP12.77□□□□□ -0.37
SCLT1-204ENST00000503215 RHBDL2Q9NX52 303 aa12.77□□□□□ -0.37
SCLT1-204ENST00000503215 A0A0A6YYD4 124 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 CA11O75493 328 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 GLAP06280 429 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 MAPK3P27361 379 aaPredicted RBP12.76□□□□□ -0.37
SCLT1-204ENST00000503215 QRFPP83859 136 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 UNC119Q13432 240 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 IRF3Q14653 427 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 SPHARQ15513 63 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 RBM48Q5RL73 367 aaKnown RBP12.76□□□□□ -0.37
SCLT1-204ENST00000503215 C1orf100Q5SVJ3 147 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 TMEM203Q969S6 136 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 CNBD2Q96M20 576 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 P2RX4Q99571 388 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 MND1Q9BWT6 205 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 ZFP57Q9NU63 452 aa12.76□□□□□ -0.37
SCLT1-204ENST00000503215 AP4M1O00189 453 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 LANCL1O43813 399 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 CNTFRP26992 372 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 OR3A3P47888 321 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 SLC35B1P78383 322 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 DEFB136Q30KP8 78 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 GPR141Q7Z602 305 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 FAM71E2Q8N5Q1 922 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 MS4A15Q8N5U1 240 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 RAX2Q96IS3 184 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 GFI1Q99684 422 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 RASL11BQ9BPW5 248 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 MRPL20Q9BYC9 149 aaKnown RBP12.75□□□□□ -0.37
SCLT1-204ENST00000503215 KCNIP1Q9NZI2 227 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 GHRLQ9UBU3 117 aa12.75□□□□□ -0.37
SCLT1-204ENST00000503215 CD37P11049 281 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 SLC2A2P11168 524 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-204ENST00000503215 SRMP19623 302 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
SCLT1-204ENST00000503215 CFHR3Q02985 330 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 EGFEM1PQ0D2K5 195 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 MED22Q15528 200 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 PNLIPRP3Q17RR3 467 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 TMEM30BQ3MIR4 351 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 LIPKQ5VXJ0 399 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 STEAP3Q658P3 488 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 TEX38Q6PEX7 206 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 TRAT1Q6PIZ9 186 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 TMEM91Q6ZNR0 172 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 ZNF695Q8IW36 515 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 MINDY2Q8NBR6 621 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 OR51D1Q8NGF3 324 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 PHYHIPQ92561 330 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 ABHD14AQ9BUJ0 271 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 PARP12Q9H0J9 701 aaKnown RBP12.74□□□□□ -0.37
SCLT1-204ENST00000503215 CST11Q9H112 138 aa12.74□□□□□ -0.37
SCLT1-204ENST00000503215 UCHL1P09936 223 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 MYF6P23409 242 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 MYCNOSP40205 109 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 RPS25P62851 125 aaKnown RBP12.73□□□□□ -0.37
SCLT1-204ENST00000503215 P2RY14Q15391 338 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 HMGN3Q15651 99 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 HSD17B12Q53GQ0 312 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 GLT8D1Q68CQ7 371 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 COMMD1Q8N668 190 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 THRSPQ92748 146 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 NABP2Q9BQ15 211 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 HDHD3Q9BSH5 251 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-204ENST00000503215 TM2D1Q9BX74 207 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 TMEM59Q9BXS4 323 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 RAB9BQ9NP90 201 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 JPT1Q9UK76 154 aa12.73□□□□□ -0.37
SCLT1-204ENST00000503215 TMEM14DPA8MWL7 114 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 CCL24O00175 119 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 SLC22A1O15245 554 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 TXNL1O43396 289 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 YPEL1O60688 119 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 DUS4LO95620 317 aaKnown RBP12.72□□□□□ -0.37
SCLT1-204ENST00000503215 UBBP0CG47 229 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 SOX6P35712 828 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 HTD2P86397 168 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 DEFB121Q5J5C9 76 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 YPEL2Q96QA6 119 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 DUSP21Q9H596 190 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 SCN3BQ9NY72 215 aa12.72□□□□□ -0.37
SCLT1-204ENST00000503215 SAA2-SAA4A0A096LPE2 208 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 ST8SIA5O15466 376 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 SOCS1O15524 211 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 NAPSAO96009 420 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 HSMCR30P0CW71 290 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 SAA2P0DJI9 122 aaPredicted RBP12.71□□□□□ -0.37
SCLT1-204ENST00000503215 BLVRBP30043 206 aaPredicted RBP12.71□□□□□ -0.37
SCLT1-204ENST00000503215 MAP2K4P45985 399 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 ACTBP60709 375 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 FOXE3Q13461 319 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 MMDQ15546 238 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 ZNF880Q6PDB4 577 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 ZNF833PQ6ZTB9 187 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 SVOPQ8N4V2 548 aa12.71□□□□□ -0.37
SCLT1-204ENST00000503215 RNF152Q8N8N0 203 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms