RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 VEGFCP49767 419 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 HTD2P86397 168 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 C2orf76Q3KRA6 126 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 KPRPQ5T749 579 aaPredicted RBP12.71□□□□□ -0.37
NR1H3-227ENST00000498548 HES5Q5TA89 166 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 CHPT1Q8WUD6 406 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 RITA1Q96K30 269 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 YPEL2Q96QA6 119 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 S1PR3Q99500 378 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 RASL11BQ9BPW5 248 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 MRPL20Q9BYC9 149 aaKnown RBP12.71□□□□□ -0.37
NR1H3-227ENST00000498548 ABCG5Q9H222 651 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 ACOT13Q9NPJ3 140 aa12.71□□□□□ -0.37
NR1H3-227ENST00000498548 LANCL1O43813 399 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 NAPSAO96009 420 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 PSMA1P25786 263 aaKnown RBP12.7□□□□□ -0.38
NR1H3-227ENST00000498548 GPR12P47775 334 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 TMEM50BP56557 158 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 LSAMPQ13449 338 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 ZNF880Q6PDB4 577 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 ZNF367Q7RTV3 350 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 ZNF554Q86TJ5 538 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 STPG2Q8N412 459 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 SVOPQ8N4V2 548 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 PHF21AQ96BD5 680 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 HSPB9Q9BQS6 159 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 URM1Q9BTM9 101 aaKnown RBP12.7□□□□□ -0.38
NR1H3-227ENST00000498548 LIN7CQ9NUP9 197 aaKnown RBP12.7□□□□□ -0.38
NR1H3-227ENST00000498548 ABRACLQ9P1F3 81 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 RAB26Q9ULW5 256 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 V9GY05 133 aa12.7□□□□□ -0.38
NR1H3-227ENST00000498548 SHISA3A0PJX4 238 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 ST8SIA5O15466 376 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 TXNL1O43396 289 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 CNTFRP26992 372 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 OR10A3P58181 314 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 TBCEQ15813 527 aaPredicted RBP12.69□□□□□ -0.38
NR1H3-227ENST00000498548 STEAP3Q658P3 488 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 LCNL1Q6ZST4 164 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 FOXRED2Q8IWF2 684 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 FAM89BQ8N5H3 189 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 WFDC9Q8NEX5 89 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 FAM3DQ96BQ1 224 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 ARHGAP5-AS1Q96IT6 56 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 NABP2Q9BQ15 211 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 PARP12Q9H0J9 701 aaKnown RBP12.69□□□□□ -0.38
NR1H3-227ENST00000498548 LRRC42Q9Y546 428 aa12.69□□□□□ -0.38
NR1H3-227ENST00000498548 SAA2-SAA4A0A096LPE2 208 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 TMEM272A0A1B0GTI8 110 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 FOXI3A8MTJ6 420 aaPredicted RBP12.68□□□□□ -0.38
NR1H3-227ENST00000498548 RGS11O94810 467 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 SAA2P0DJI9 122 aaPredicted RBP12.68□□□□□ -0.38
NR1H3-227ENST00000498548 SLC2A2P11168 524 aaPredicted RBP12.68□□□□□ -0.38
NR1H3-227ENST00000498548 RPL23AP62750 156 aaKnown RBP12.68□□□□□ -0.38
NR1H3-227ENST00000498548 FOXB2Q5VYV0 432 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 C8orf86Q6ZUL3 223 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 PECRQ9BY49 303 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 BLOC1S6Q9UL45 172 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 DNAH3Q8TD57 4116 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 NOTCH3Q9UM47 2321 aa12.68□□□□□ -0.38
NR1H3-227ENST00000498548 NUDT19A8MXV4 375 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 DENRO43583 198 aaKnown RBP12.67□□□□□ -0.38
NR1H3-227ENST00000498548 SCTP09683 121 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 SLC35B1P78383 322 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 RPL39P5Q59GN2 51 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 PLAC9Q5JTB6 97 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 ETV3LQ6ZN32 361 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 ZNF833PQ6ZTB9 187 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 FAM71E2Q8N5Q1 922 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 OR2AK2Q8NG84 335 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 ABHD14BQ96IU4 210 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 DUX3Q96PT4 197 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 IFI27L2Q9H2X8 130 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 STEAP1Q9UHE8 339 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 SLC23A1Q9UHI7 598 aa12.67□□□□□ -0.38
NR1H3-227ENST00000498548 A0A0B4J203 849 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 SMIM30A4D0T7 59 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 AP4M1O00189 453 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 LDLRAD4O15165 306 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 RPLP1P05386 114 aaKnown RBP12.66□□□□□ -0.38
NR1H3-227ENST00000498548 ACTBP60709 375 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 HLA-DRB3P79483 266 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 MMDQ15546 238 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 PNLIPRP3Q17RR3 467 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 MOGAT2Q3SYC2 334 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 LY6G6FQ5SQ64 297 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 GLDNQ6ZMI3 551 aaPredicted RBP12.66□□□□□ -0.38
NR1H3-227ENST00000498548 KLHL30-AS1Q8NEE0 82 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 OR8H1Q8NGG4 311 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 CMSS1Q9BQ75 279 aaKnown RBP12.66□□□□□ -0.38
NR1H3-227ENST00000498548 Q9N2K0 584 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 AURKAIP1Q9NWT8 199 aaPredicted RBP12.66□□□□□ -0.38
NR1H3-227ENST00000498548 RNF150Q9ULK6 438 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 HSF4Q9ULV5 492 aa12.66□□□□□ -0.38
NR1H3-227ENST00000498548 TRBV6-6A0A0A6YYG2 114 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 PDCD5O14737 125 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 SOX6P35712 828 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 CEACAM6P40199 344 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms